Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01831 ATGTTTCTCCGTACTCCATCGTCTTGTTACATTGTCGCCTACGCAAGGAGTTGCGTCGTCATCGTCACCCTAAAGTCCCATTTTGCCTCCACCTACAAGAAGGAGTTATTGTCACCACCATTCTTCTATCGTAACTTTCAAAAACCAGAGCCAAGGTCACCCGAGAGACACCGTCGCGGGTGTGTTCTCTCGGCGTGCCCGCTCACCATGTCCGGCGGTGATAGCGATAGCAGCAGCGACGGCGGAGAGCGGGGGCGGCGCGGGGAGACGCTGGACTTCCGGAACCTGAAGGTGGTGTCGGCGGTGGGACGCGGCGCGAAGGGCGTGGTGTTCCTGGCGCGGGTGGAGGGTGAAGGGAGCGGGGAGTGGATAGCGCTGAAGGTGGTGTCGAGGGAGCTGCTGAGGAAGAAGAACAGGAACGAGGGAAGGTGCAAGAGGGTGTCGTTCGAGAGGCACATACTCCGTCGTTTGGATCACCCGCTATTGCCCAGATTCCGAGGCGCTTTCGATACCGACCAACTCACCGGTTTCGCAATCGATTATTGCCACGGCGGAAACCTCCATTCACTCCGGATGAAGCAACCGGAGAAGTGCTTCTCCGAAGAAACCGTAAGGTTTTATGCAGTAGAATTGGTTCTAGTATTGGAGTATTTGCACAAGTTTGGATTAGTGTATAGGGATTTAAAGCCAGAGAATATCATGATCCAAGAATCAGGTCACATAATGCTAGTGGATTTTGATCTTTCCAAGAAGTTAAATATTAGGTCAACCGAGTCGAGTTGCAACTCATCACCGGGTTCTGGTTCTGGTTCTGAGTCGTTGAGGGAGAAGGATCGGAGGAAGCGGCGATTATCACGATTCAACTGTTACTGTCATTCAGGGATATCCTTGTACGAGTCAGATATATCGAACCAACTCAACACCATCCCAATGCGTCGTAGCATGTCAGACTCGGTGGAGAAGTCCAACTCCTTTGTGGGAACGGAAGATTACGTGGCACCGGAGGTCATCTCCGGAGAAGGACACGACTTCGCCGTTGATTGGTGGTCATTAGGCGCTGTTATGTACGAGATGATTTACGGAGCGACGCCGTTTAAGGGTGCGAATAGGAAAGAAACGTTTCATCGCATCATAACCAAGGAGCCCGATTTATCTGGTGCAACAACGCCTTTGAGGGACTTGATTCAAAGCTTGCTTCACAAGGATCCTAACCGTAGGATCCAGGTAAATGAGATCAAGAACCACCCTTTCTTTAAAGGCGTCATGTGGGACACAATCTTGGAAATTTCACGTCCACCGCATATTCCTCAAAATGAGATCAAGGATTCAGCAGGGTTTTCTCTAAAGGATGTAGAATCATTTGTTCATGGAATCTTCTTTCCCAAGAGTAAAGAGGAACCAAAAACCAATGAAAACCAAACCCCAAAGGAGGAAACCAATAAAAATGCCTGGGTTGACAAGTTAAATCAAAATTCTGCCAAAGATGAAAACTTTTTAATTTTTTGA 1506 0.4914 MFLRTPSSCYIVAYARSCVVIVTLKSHFASTYKKELLSPPFFYRNFQKPEPRSPERHRRGCVLSACPLTMSGGDSDSSSDGGERGRRGETLDFRNLKVVSAVGRGAKGVVFLARVEGEGSGEWIALKVVSRELLRKKNRNEGRCKRVSFERHILRRLDHPLLPRFRGAFDTDQLTGFAIDYCHGGNLHSLRMKQPEKCFSEETVRFYAVELVLVLEYLHKFGLVYRDLKPENIMIQESGHIMLVDFDLSKKLNIRSTESSCNSSPGSGSGSESLREKDRRKRRLSRFNCYCHSGISLYESDISNQLNTIPMRRSMSDSVEKSNSFVGTEDYVAPEVISGEGHDFAVDWWSLGAVMYEMIYGATPFKGANRKETFHRIITKEPDLSGATTPLRDLIQSLLHKDPNRRIQVNEIKNHPFFKGVMWDTILEISRPPHIPQNEIKDSAGFSLKDVESFVHGIFFPKSKEEPKTNENQTPKEETNKNAWVDKLNQNSAKDENFLIF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01831 501 MobiDBLite consensus disorder prediction 256 271 - -
Phco3g01831 501 Gene3D Transferase(Phosphotransferase) domain 1 186 261 - -
Phco3g01831 501 FunFam Serine/threonine-protein kinase OXI1 186 254 - -
Phco3g01831 501 ProSiteProfiles Protein kinase domain profile. 96 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01831 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Phco3g01831 501 Gene3D Phosphorylase Kinase; domain 1 96 185 - -
Phco3g01831 501 MobiDBLite consensus disorder prediction 462 489 - -
Phco3g01831 501 SUPERFAMILY Protein kinase-like (PK-like) 95 448 IPR011009 -
Phco3g01831 501 SMART serkin_6 96 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01831 501 Pfam Protein kinase domain 98 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01831 501 Pfam Protein kinase domain 320 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01831 501 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 501 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco3g01831 501 PANTHER FLIPPASE KINASE 1-RELATED 88 441 - -
Phco3g01831 501 FunFam Serine/threonine-protein kinase OXI1 320 437 - -
Phco3g01831 501 MobiDBLite consensus disorder prediction 462 483 - -
Phco3g01831 501 Gene3D Transferase(Phosphotransferase) domain 1 319 437 - -
Phco3g01831 501 MobiDBLite consensus disorder prediction 256 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01831 Phco-Chr3 42065700 42068839 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phco3g01831 Pkinase 1.2e-30 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01831 3 42065700 42068839 Phco3g01831 3 42065700 42068839 ECH