Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01782 ATGATGGCCTTAGAAGATGTACGTGATCGTACTTTTATGGATTTTGTGGTGGTGGATTCGGACAAGGCAAATGAAGCCGAGTGTTGCTGTCTAGAAGAGAGTACAAGTATATATGGAGTTGAAATTCAAGAGCCATATGTGGGCATGGAATTTGATTCTGAAGTAGCTGCTCGGAAATTTTATATTGATTATGCCAGACGGTTAGGATTTGTTGTACGCATAATGCAAAGGCGACGTTCTGGAATTGATGGGAGGACTCTTGCTCGCCGGCTTGGATGTAACAAACAAGGATTCTCACCAAATAACAAGGGAGCATTGGGACCAGAGAAAAAGCCAAGACCTAGTGCCCGTGAAGGTTGCAAGGCAACTATCTTGGTAAAGTTGGAAAAATCTGGAAAATGGGTTGTCACCAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACGACTAATGGGTTTGGCACAGTGGGTGATAAAGATAAGAAAATTTCAGAACTTACAATGGAGTTGGAACGCCAAGATCAACTATGTGCTGCATATCGAGAAAAACTGCTCAGCTTTATAAACAATGTTGAGGAGGAGACAGAGGAACTGTCCACAAAAATTCAACTCGTTATTGAGAATGTAAGGAGAGCCGAGTCTGAAATGAAAAAATGTTCACAGAACAGAAATCCTTGGTGA 684 0.4137 MMALEDVRDRTFMDFVVVDSDKANEAECCCLEESTSIYGVEIQEPYVGMEFDSEVAARKFYIDYARRLGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGALGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATTNGFGTVGDKDKKISELTMELERQDQLCAAYREKLLSFINNVEEETEELSTKIQLVIENVRRAESEMKKCSQNRNPW 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01782 227 MobiDBLite consensus disorder prediction 96 117 - -
Phco3g01782 227 Pfam FAR1 DNA-binding domain 59 148 IPR004330 -
Phco3g01782 227 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 212 - -
Phco3g01782 227 Coils Coil 164 184 - -
Phco3g01782 227 Coils Coil 189 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01782 Phco-Chr3 40816040 40820730 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco3g01782 FAR1 2.6e-28 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01782 3 40816040 40820730 Phco1g01805 1 57563387 57565808 PCT