Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01781 ATGAAATGCATGTTGCGACATTCTGAGAAGACAAATCTTGTAAAGCAGCTCAATGTCGTTGGTGTTGAAGGCGACGAGGAGATCGAGGTCGGCATTGGACTGGACAAGGGAATCATGGACCTGCGTGACAACGATGGGACAGTTTTGTTCCACGTCGGAGATTCTGGTGGTTTCCTCGATGGTGGGAGGAGAGAAGCCTTCATAGATGAGGAAGTTTCCCCATCACTATGTCTTCACACTAGTGGACACTCTCTCACAATGAAGAAAATTGAGCATTTTTCAATTCAGAAGGTTACAGGGGATGGGCAATTTTTGTTTCATGCACTGACTTATATATCCAATAATGAAAGGATTGTGCACCTCAAACCTCAACCTTCAATCAACAAATCTAAATCTTCTGATGTAAGTCCCGAGTCTAAATCCAAAGAACCCAGCATAAGACCGAAGTCTAGAGGCAAGTGTGAAGAATGTGGAAAACACTTGCAAGATGAACACAACCGCTTCTGCTCCATTATTGCAATATTGCAATGCTTCCATTGGATATTGAAAACCAAAGTGCCTTCATTTTCATTTTTGTTTTTAGGTATCCAAGAGTGGATAAAGCGTGTGGCAAAGATACCAGTTGACGGGAAAGAAAGGCCATCTGATGTTTATGCCATTGAATTGGGTGGAACTATAGGTAAATAA 687 0.4207 MKCMLRHSEKTNLVKQLNVVGVEGDEEIEVGIGLDKGIMDLRDNDGTVLFHVGDSGGFLDGGRREAFIDEEVSPSLCLHTSGHSLTMKKIEHFSIQKVTGDGQFLFHALTYISNNERIVHLKPQPSINKSKSSDVSPESKSKEPSIRPKSRGKCEECGKHLQDEHNRFCSIIAILQCFHWILKTKVPSFSFLFLGIQEWIKRVAKIPVDGKERPSDVYAIELGGTIGK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01781 228 Pfam PLATZ transcription factor 110 171 IPR006734 -
Phco3g01781 228 MobiDBLite consensus disorder prediction 123 153 - -
Phco3g01781 228 Gene3D - 191 228 IPR027417 -
Phco3g01781 228 MobiDBLite consensus disorder prediction 135 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01781 Phco-Chr3 40793775 40795695 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco3g01781 PLATZ 3.3e-12 No_clan