Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01772 ATGCATCAGAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCGTAGGCGTCTCTTCCGATTTTAATCCTTCGCCGCCTCTGCAATACCAGAAACACCCTCACCAACGTCACCAATTTTATCCGCAAATCGAAATCGACATCTCCCCACCGCAACAGCGCAGCGTTGTGCCGCAGGGAACCCCTCCACCCTCCCTCTCCAAGCAGAAGCACCTCAACCCGCACGCCCAGCCGCCTCTCTTCAAGTCGCACAACGCCGCCTTCTTCTCTGTAACGGTCGCCGCCAAGAGCGCCGCGTTTCGCGCGCTGCGTCGCGTGAGGCGGCAGCGCGCGTTGCTCCTACTCGCGGTGCCGCTGCTCTACCTCTACTTCCTCGTCTCGCGGTCCTTCCTCCTCGACCTCCTCTCCGCGATCGCCTTCTCCACTGCGCTTGTGTTCTCGCTCAACCTCGCGTTCCCGCTGCCGCTCCGCTCGATTCGGCTCAAGTCACCGTCCGCGGTGGTCGCGCGCCCCGCGTCGCCACTGCCTGTTTTCTGGACGATTGGGTCGCGGCCCAAGTCGGAGAAGCGCGTGGCGTCGGGGTGCTGGGTGCAGGTCTTCGGAAACGGCGACGTTTACGAGGGGGAGTTTCACCGAGGGAAGTGTTCCGGGAGCGGGGTGTATTATTATAGTAGGAGTGGGAGGTACGAGGGGGATTGGGTGGATGGAAAATACGATGGCTATGGGGTGGAGACTTGGGCGCGAGGGAGTCGCTACCGAGGGTGTTACCGGCAGGGCTTGAGACACGGGTTTGGGGTGTATAGGTTTTACACAGGGGATGTGTACGCCGGCGAGTGGTCTAATGGACAGAGTCATGGGTGTGGGGTTCACACGTGCGAGGATGGGAGTAGGTACGTTGGAGAGTTCAAGTGGGGTGTTAAGCATGGCCTTGGTCATTACCATTTCAGAAATGGTGATACATATGCGGGTGAATACTTTGCGGACAAGATGCATGGTTTTGGGATATATCATTTTGCAAATGGCCATCGATATGAAGGAGCCTGGCATGAAGGTAGAAGGCAGGGACTTGGCATGTATACATTTAGAAATGGTGAAACCCAATCTGGTCACTGGCAAAATGGATTCCTTGACATTCCAAGCACTCAAAGCACTACGTATCCAGTTTCTCCTGTTGGTGTCTCTCATTCCAAAGTGCTCAATGCAGTGCAGGAAGCAAGACGAGCAGCAGAGAAAGCATATGAAGTGGCTAAGGTAGATGAAGGGGTGAATAGAGCTGTAGCAGCTTCTAATAGAGCAGCCAATGCAGCCAGAGTAGCGGCTGTGAAAGCTGCACAAAAGCAGTTGCATGTTAACAATGAAAGCTTCGCAATTCCTGTTATGTAA 1380 0.5493 MHQKKSEVQIGKESVGVSSDFNPSPPLQYQKHPHQRHQFYPQIEIDISPPQQRSVVPQGTPPPSLSKQKHLNPHAQPPLFKSHNAAFFSVTVAAKSAAFRALRRVRRQRALLLLAVPLLYLYFLVSRSFLLDLLSAIAFSTALVFSLNLAFPLPLRSIRLKSPSAVVARPASPLPVFWTIGSRPKSEKRVASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGYGVETWARGSRYRGCYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGIYHFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGFLDIPSTQSTTYPVSPVGVSHSKVLNAVQEARRAAEKAYEVAKVDEGVNRAVAASNRAANAARVAAVKAAQKQLHVNNESFAIPVM 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01772 459 MobiDBLite consensus disorder prediction 51 71 - -
Phco3g01772 459 Gene3D - 281 325 - -
Phco3g01772 459 Gene3D - 187 234 - -
Phco3g01772 459 Gene3D - 326 390 - -
Phco3g01772 459 Gene3D - 235 280 - -
Phco3g01772 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 234 279 - -
Phco3g01772 459 Coils Coil 398 418 - -
Phco3g01772 459 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 29 414 - -
Phco3g01772 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 280 325 - -
Phco3g01772 459 Pfam MORN repeat 228 250 IPR003409 -
Phco3g01772 459 Pfam MORN repeat 251 273 IPR003409 -
Phco3g01772 459 Pfam MORN repeat 297 319 IPR003409 -
Phco3g01772 459 Pfam MORN repeat 343 364 IPR003409 -
Phco3g01772 459 Pfam MORN repeat 205 223 IPR003409 -
Phco3g01772 459 Pfam MORN repeat 320 342 IPR003409 -
Phco3g01772 459 Pfam MORN repeat 274 296 IPR003409 -
Phco3g01772 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 189 233 - -
Phco3g01772 459 MobiDBLite consensus disorder prediction 1 33 - -
Phco3g01772 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 326 371 - -
Phco3g01772 459 SMART morn 249 270 IPR003409 -
Phco3g01772 459 SMART morn 295 316 IPR003409 -
Phco3g01772 459 SMART morn 203 224 IPR003409 -
Phco3g01772 459 SMART morn 226 247 IPR003409 -
Phco3g01772 459 SMART morn 318 339 IPR003409 -
Phco3g01772 459 SMART morn 341 362 IPR003409 -
Phco3g01772 459 SMART morn 272 293 IPR003409 -
Phco3g01772 459 MobiDBLite consensus disorder prediction 51 74 - -
Phco3g01772 459 MobiDBLite consensus disorder prediction 12 31 - -
Phco3g01772 459 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 245 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01772 Phco-Chr3 40109764 40116873 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01772 3 40109764 40116873 Phco3g01772 3 40109764 40116873 ECH
Phco3g01772 3 40109764 40116873 Phco1g01048 1 11956736 11958910 PCT
Phco1g01914 1 58813197 58819230 Phco3g01772 3 40109764 40116873 PCT