Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01766 ATGAAGCTGAATCCCTTCTGCATCGTTTTACCACCAAATTCTGGTGAAATGGTGGTGCCACTTGAAAAGGGTGTCCAACAAGAACCCTTTCAAACACCAAAGAAACAAGTTGAGGCCAAACAGCCTCACAGGGCATGTGTGGGGCAAGTTCTTGCTTCTCTTGGTGATTTTTTGGGCAAGTTGTATGACTCAGGGTGGTGGAGAATTTGCCAGAAAGGAGAGCACAAAGAGAAGCACAACTCTGGTGTGCTGTTTCATGATATGGATGGTGTGCAAGTTTCTGTCAACATTGGCAGGGACAACCCCAGAATTTTCAGCTATGCAGAGCTGTTCATAGGGTCCAATGGTTTCAGTGAAGACCAAGTTTTAGGGAGTGGAGGGTTTGGCAAAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACCGTGGTTGCTGTGAAGTGCTGTTTGGCAGGGAAAGGCAAGCAGTTTGAGAAAAGTTTTGCAGCAGAGTTAACAGCTGTCGCTGATCTTCGCCACAAGAATCTTGTGAGGCTGAGGGGTTGGTGTGTCAATGAAGATCAGTTGCATCTTGTTTATGACTACATGCCAAACCGAAGCCTTGACCGTGTACTATTTCGCAGGCATGAGAACTTGAAGGCTAAGCCTCTTCAATGGGGACAAAGAGGGAAGATTGTGAAGGGTTTGGCAGCTGCATTGTACTATCTCCATGAGCAATTAGAGACTCAAATCATTCATAGGGATGTTAAGACCAGCAATGTGATGCTTGATTCCCATTACAATGCTCGGTTGGGTGACTTTGGCATGGCAAGGTGGCTAGAGCATGAGCTTGAGTATGAGTATAAGTATAACAACAGGAAAACAACATCAATCAGAAATGACCATTTCAGATTGGGAGAGACATCAAGAATTGGGGGCACAATTGGGTATCTTCCTCCTGAAAGCTTGCAGAAACCAAGCAATGCTACCTCCAAATCTGATGTCTTCAGTTTTGGGATTGTTGTGCTAGAGGTGGCGTCTGGAAGGAGAGCAATCGATCTCACGCAGCCAGATGAACAAATGATTTTGCTTGACTGGATTAGAAGGCTTTCTGATGAAGGAAAGCTTCTGGAAGCAGCTGATACAAGGCTACCAGATGGATCCTTCATGCTTTCAGAGATGCAGCATTTCATTCACACAGGCCTCCTCTGCACACTCCACGACCCACAATTGAGGCCAAGCATGAAATGGGTTGTGGAAGCTCTTTCTGACATTTCTTTTAAACTACCATCACTTCCTTCTTTTCTCTCCCACCCTTTATACATCTCTTTGTCTTCCCCATCTGATACTAGTCATAGTCCAAGCAGCACAAGTGGCACTAGCTCTACCACAGATAATGCAAGCATAATCACCAGCAATACCTCATCAAACTATGTCACAGCCGCAGGTGAAACTGTGTATGTAACCGCTGAGTACAAAAACAGTGAAATCATCTCTTCTAAGAGCATGCACCACCACCGACCATTTCCTGTGGTAGAAACTCCAAGAGAAATATCATACAAGGAGATTGTTTCTGCTACAGATAACTTCTCCGATTCAAGAAGGGTGGCTGAGCTAGACTTTGGAACTGCTTACCATGGCATCCTTGATGACCAATGCCATGTTTTGGTGAAACGCCTTGGGATGAAGACATGTCCTGCACTGCGTGATAGATTCTCCAACGAACTCCGGAATCTGGGACGGCTTCGCCATAGGAATTTGGTTCAACTTCGTGGATGGTGCACTGAGCAAGGAGAGATGCTTGTTATTTATGATTACTCGGCAAGTAGAATTCTCAGCCAACTGCTTATGCATCATAACAATGGAAGTACAAGTGGGGCTTCTTTCCTCCAATGGCATTACAGGTACAACATAGTGAAAGCACTGGCCTCTGCAGTACTCTATCTACATGAGGAGTGGGATGAACAAGTGATCCACAGAAACATTACCTCTTCAGCTGTCATTCTTGAACAAGATATGAATCCAAGACTCAGCTCTTTTGCTCTAGCAGAATTTTTGTCAAGGAATGAGCATGGTCATCATGTAGTTGCTGACACTAGAAAATCGGTTCGTGGGATTTTCGGCTACATGTCACCAGAATACGTGGAATCAGGTGAAGCAACCACTGAAGCTGATGTTTATAGTTTTGGTGTAGTGGTGCTTGAAGTTGTCAGTGGACAGATGGCAGTAGATTTTAGGCAACCAGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGACGAGAAAAAGACCATTGAAGGAATTAGCTGACATTAGACTCAATGGAGAATACAATGACCAAGAATTGATGAGATTAGTGGGGTTAGGAATTGCTTGCACCCGTTGCAACCCGCAGTTAAGACCAAGCATGAGACAAATAGTAAGCATTCTTGATGGCAATGACAAATTACTTGTCCATAATAACAAGGAGAGCAGGGAAGAATGGAGACAAAGAAATTACTGTTCTTTGTCAATGATTAAGAGAATCCAAGCTCTAGGAATACAGTAA 2526 0.4426 MKLNPFCIVLPPNSGEMVVPLEKGVQQEPFQTPKKQVEAKQPHRACVGQVLASLGDFLGKLYDSGWWRICQKGEHKEKHNSGVLFHDMDGVQVSVNIGRDNPRIFSYAELFIGSNGFSEDQVLGSGGFGKVYKAVLPSDGTVVAVKCCLAGKGKQFEKSFAAELTAVADLRHKNLVRLRGWCVNEDQLHLVYDYMPNRSLDRVLFRRHENLKAKPLQWGQRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGMARWLEHELEYEYKYNNRKTTSIRNDHFRLGETSRIGGTIGYLPPESLQKPSNATSKSDVFSFGIVVLEVASGRRAIDLTQPDEQMILLDWIRRLSDEGKLLEAADTRLPDGSFMLSEMQHFIHTGLLCTLHDPQLRPSMKWVVEALSDISFKLPSLPSFLSHPLYISLSSPSDTSHSPSSTSGTSSTTDNASIITSNTSSNYVTAAGETVYVTAEYKNSEIISSKSMHHHRPFPVVETPREISYKEIVSATDNFSDSRRVAELDFGTAYHGILDDQCHVLVKRLGMKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVIYDYSASRILSQLLMHHNNGSTSGASFLQWHYRYNIVKALASAVLYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGHHVVADTRKSVRGIFGYMSPEYVESGEATTEADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFETRKRPLKELADIRLNGEYNDQELMRLVGLGIACTRCNPQLRPSMRQIVSILDGNDKLLVHNNKESREEWRQRNYCSLSMIKRIQALGIQ 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01766 841 SUPERFAMILY Protein kinase-like (PK-like) 495 803 IPR011009 -
Phco3g01766 841 SUPERFAMILY Protein kinase-like (PK-like) 101 454 IPR011009 -
Phco3g01766 841 PANTHER - 79 416 - -
Phco3g01766 841 ProSiteProfiles Protein kinase domain profile. 522 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01766 841 Gene3D Phosphorylase Kinase; domain 1 481 598 - -
Phco3g01766 841 Gene3D Phosphorylase Kinase; domain 1 89 194 - -
Phco3g01766 841 FunFam Receptor like protein kinase S.2 600 826 - -
Phco3g01766 841 MobiDBLite consensus disorder prediction 439 461 - -
Phco3g01766 841 FunFam Receptor like protein kinase S.2 195 420 - -
Phco3g01766 841 FunFam Receptor like protein kinase S.2 482 598 - -
Phco3g01766 841 Pfam Protein tyrosine and serine/threonine kinase 528 802 IPR001245 GO:0004672|GO:0006468
Phco3g01766 841 ProSiteProfiles Protein kinase domain profile. 117 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01766 841 ProSitePatterns Protein kinases ATP-binding region signature. 123 152 IPR017441 GO:0005524
Phco3g01766 841 SMART serkin_6 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01766 841 Gene3D Transferase(Phosphotransferase) domain 1 195 420 - -
Phco3g01766 841 FunFam Receptor like protein kinase S.2 91 194 - -
Phco3g01766 841 Pfam Protein kinase domain 118 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01766 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Phco3g01766 841 Gene3D Transferase(Phosphotransferase) domain 1 603 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01766 Phco-Chr3 39882822 39885347 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco3g01766 Pkinase 3.9e-44 CL0016