Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01752 ATGCTTGGAATGACTTCAAAACTTAACCAAGGAGATGACTCTCATGGGGGTAATGCTTCAAAGCCAATCCACTTTTTCAGGATCATGCTCTCCCACAACCTTCTGCACGGAAAACTAAGGCTTCCATCAAAGTTTGTGAGCAAATATGGAAATCACCTACCCAATACAATATTTCTTAAGCTTCCAAATGATGCAGAATGGGAAGTAAAATTGGAGAAAAGTGATGGCAGTGTTTGGTTTCAGAAAGGTTGGAAAGAGTTTGTGGAGTATCACTGTCTAGTTCATGGACACCTTTTGGTTTTCAGATACAATGGAACATCGCATTTCCATGTACTCATCTGTGATATGAGTTGCATGGAAATAGACTACCCTGTCAACAAAGCAAATCACAAAAGGATCAGAATTAATAGTGAAGACATTCAACCACCTAAGACGCAGAAACCAACACAGAATGAGAAAAGGTCCGATGAAGAAGTCAGAGACCACAAAGGTATTTTGAAGAATCTAAATGAAGGGAAGAGAAAGATGGAAGCTGTTGGGAGTACTTCCTTCATTGTGATAATGAAACCTAGCAACTTAATTACTGGGTATATGGTCCCAGTGAGGAGCTACATCAAACGTCGTGAACAATATGTTACTCTTCTTGTTGGGGACAGATCATGGAGGGTTAAATTGATCCATTATCGAAATGATACAGTTTACTTCACAAATTTCTTACATTTTGCAAGGGATAACGATTTAAAAGAAGGAGATGCTTGCTTTTTCCAACTCATAAACATGGGTGATGATGACATGGTGTTTAGGGCTACCTTTTGTAAACAGACACTCCTCTCGAGTACTAAAAGGGAAATAACCTAA 858 0.3893 MLGMTSKLNQGDDSHGGNASKPIHFFRIMLSHNLLHGKLRLPSKFVSKYGNHLPNTIFLKLPNDAEWEVKLEKSDGSVWFQKGWKEFVEYHCLVHGHLLVFRYNGTSHFHVLICDMSCMEIDYPVNKANHKRIRINSEDIQPPKTQKPTQNEKRSDEEVRDHKGILKNLNEGKRKMEAVGSTSFIVIMKPSNLITGYMVPVRSYIKRREQYVTLLVGDRSWRVKLIHYRNDTVYFTNFLHFARDNDLKEGDACFFQLINMGDDDMVFRATFCKQTLLSSTKREIT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01752 285 PANTHER B3 DOMAIN-CONTAINING 18 260 - -
Phco3g01752 285 CDD B3_DNA 24 115 IPR003340 GO:0003677
Phco3g01752 285 SUPERFAMILY DNA-binding pseudobarrel domain 20 117 IPR015300 -
Phco3g01752 285 CDD B3_DNA 183 273 IPR003340 GO:0003677
Phco3g01752 285 SMART B3_2 25 117 IPR003340 GO:0003677
Phco3g01752 285 SMART B3_2 184 275 IPR003340 GO:0003677
Phco3g01752 285 Pfam B3 DNA binding domain 28 115 IPR003340 GO:0003677
Phco3g01752 285 Pfam B3 DNA binding domain 205 267 IPR003340 GO:0003677
Phco3g01752 285 MobiDBLite consensus disorder prediction 149 163 - -
Phco3g01752 285 Gene3D - 167 275 IPR015300 -
Phco3g01752 285 ProSiteProfiles B3 DNA-binding domain profile. 24 117 IPR003340 GO:0003677
Phco3g01752 285 Gene3D - 18 118 IPR015300 -
Phco3g01752 285 SUPERFAMILY DNA-binding pseudobarrel domain 182 259 IPR015300 -
Phco3g01752 285 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01752 Phco-Chr3 38952736 38954106 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phco3g01752 B3 1.2e-07 CL0405