Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01737 ATGAAAATGATGGGACTGGGGAAGACTTTGCAAGCTATCTCCTTTTTGAGCTATTTAAAAGTGTGCCGGTTGTCTCATGGGCCATTTTTGGTTATATGCCCTCTAAGTGTGACTGAGGGTTGGGCGTTAGAGATAGTGAAATTTACCCCCAGACTAGAAGTCTTCAAATATGTTGGTGATAAAGAAAATAGGTGCAATCTTCGCAAGAAAATACATGAACATGTAACAAGACAGTCATCAACAATGAATGTCTTGTTGCCTTTTGATGTGCTATTAACTTCATATGACATTGCACTAATGGATCAGGATTTTCTTTCTCAAATACCATGGCAGTATGCAATCATTGATGAAGCTCAAAGACTTAAAAATCCATCTAGTGTATGTTGA 387 0.3773 MKMMGLGKTLQAISFLSYLKVCRLSHGPFLVICPLSVTEGWALEIVKFTPRLEVFKYVGDKENRCNLRKKIHEHVTRQSSTMNVLLPFDVLLTSYDIALMDQDFLSQIPWQYAIIDEAQRLKNPSSVC 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01737 128 Gene3D - 2 128 IPR038718 -
Phco3g01737 128 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 128 IPR014001 -
Phco3g01737 128 PANTHER SNF2/RAD54 HELICASE FAMILY 4 127 - -
Phco3g01737 128 Pfam SNF2-related domain 4 126 IPR000330 GO:0005524|GO:0140658
Phco3g01737 128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 126 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01737 Phco-Chr3 37829123 37830950 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Phco3g01737 SNF2_N 1.3e-21 CL0023