Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01723 ATGGAAAGAGACTCCACGTGTCAATGGGAAACACGTCACATCATCCCTTCTTGCGTCCCTGTCCCACCTATCGAAAAAGTCCTTACCTTTTCGCTCACTTTTTCTTGCCTTCCCAAGAGTGAGAAACCAAAACTCCAACAGAGAAAGGGAGAGAGCGTTAGTGTGTGTTTGTGTTTTGGTGTGTGCATTCATTCAGCGATGTGCAACAAGAACAGTCCTTCTTCTCCAGACATTCAAACAACCTCTATTATGAAGAGGACACGGAGACCAACCAAACGTTATCACTGTTCTTCCTCCTCCTCCTCCTCTTCTTCGTCGCTTAAGCCGCACCGGCGCGGAAACCGGACCAAGACGAGGAGGCCCAAGTTCGTTAGCCTGCGTCTTCAGCTATCCGAGCCCAACAACATAGCTGCCCAGCCCAAGCCCAAGGCCCTGCAGCAGCCGCAGCTGAACCTCTTCCCTCTGCATCCGGAGCATCATGACATGCACGAGGAGCAGAACGTGGCGCTGCTCTTCAGCGCGGACGGCGGGGCAACGCTGACAGGCCTTCTAGAGGAGGATTCGATGTCGCCGTCGTCGGCGACTACAGAGGGGTCGCTGTCGGCGCTGACGTGTCCGACGGAGGACGCGGGGAATTGGCTAGTGAGGAAGGCGATGCGGCGCAGGGAGAGCGAGGAGGGGAGCGAGGAAAGGTGGGTATGCTATTCGGAGGTGGTGGAGGAGAAGAAGGAGGCGATGGAGGAGGTGACGAGTTATTGCATGATGGGGACAACGACGACCACAACGTCCTTTGGGTTGTTGTCTTTGAAGCTGGATCACCAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCGCTATACGTCGCGGGGGAGGGAGGCCCACACACTGTCCCAGACTTCCTCAATGGTTTCCTCCTTCATAATGCCTTCCTCCACCATGTTGCATGGGATGGCTGGGGAAATGGTGTGGTTGGGAACACATGGGGTGTTCCTGAAGATTGTGGGGCAAACAAGACGAATTTGAAGGAGGAAAATGGTTGGAAGTTGGGGCAGAGAGAAGCAAGTGTGCAAAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTCTCTAAGAAGATCCGTTATGAAGTTCGCAAGCTGAATGCTGAGAAACGGCCCAGGATGAAGGGTCGATTTGTGAAGCGGGAATGA 1188 0.5387 MERDSTCQWETRHIIPSCVPVPPIEKVLTFSLTFSCLPKSEKPKLQQRKGESVSVCLCFGVCIHSAMCNKNSPSSPDIQTTSIMKRTRRPTKRYHCSSSSSSSSSSLKPHRRGNRTKTRRPKFVSLRLQLSEPNNIAAQPKPKALQQPQLNLFPLHPEHHDMHEEQNVALLFSADGGATLTGLLEEDSMSPSSATTEGSLSALTCPTEDAGNWLVRKAMRRRESEEGSEERWVCYSEVVEEKKEAMEEVTSYCMMGTTTTTTSFGLLSLKLDHQGILNAWSDKGSLYVAGEGGPHTVPDFLNGFLLHNAFLHHVAWDGWGNGVVGNTWGVPEDCGANKTNLKEENGWKLGQREASVQRYKEKRQSRLFSKKIRYEVRKLNAEKRPRMKGRFVKRE 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01723 395 ProSiteProfiles CCT domain profile. 352 394 IPR010402 GO:0005515
Phco3g01723 395 MobiDBLite consensus disorder prediction 94 109 - -
Phco3g01723 395 Pfam CCT motif 352 394 IPR010402 GO:0005515
Phco3g01723 395 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 81 395 - -
Phco3g01723 395 MobiDBLite consensus disorder prediction 72 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01723 Phco-Chr3 33242313 33247418 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco3g01723 CCT 1.4e-18 CL0281