Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01653 ATGTTGTTACCAAAAAAGGAAGTACCCGGATGTGCTTTAGTGAAGATCATGGCCTCTTCTAGTTACTCTAACTCTCCCTGTGCTGCCTGCAAGTTTTTGAGAAGGAAATGCATGCCGGATTGCATTTTTGCCCCATATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTTCACAAGATATTTGGTGCCAGCAACGTGAGTAAACTCCTGAATGAAGTCCAACCCCATCAAAGGGAGGATGCAGTGAATTCTCTGGCTTATGAAGCTGAAGCACGGATAAAAGATCCAGTTTATGGTTGTGTTGGAGCAATTTCAGTGCTCCAAAGACAAGTAATTAGGCTCCAAAAGGAACTTGATGCAACAAACGCTGATTTGATCCGCTATACCTGCAATGAAATTCCCACTCAAGATGGGAGAAGAATGGGTGAAGGGGGAGGTTCCTCTCTAGGTCAATCTCCTGGTTATTACTACCCTTCTCCTTGGAACAATGATCCACTTGGGGATGGTTATCACAGAGGTGACAATAATATGTGA 537 0.4395 MLLPKKEVPGCALVKIMASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNEIPTQDGRRMGEGGGSSLGQSPGYYYPSPWNNDPLGDGYHRGDNNM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01653 178 Coils Coil 105 125 - -
Phco3g01653 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 132 - -
Phco3g01653 178 ProSiteProfiles LOB domain profile. 25 126 IPR004883 -
Phco3g01653 178 Pfam Lateral organ boundaries (LOB) domain 26 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01653 Phco-Chr3 22306194 22307303 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco3g01653 LOB 1.1e-42 No_clan