Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01563 ATGGTAAGGTGGTGCAGGAGCAAAGGAGCTGGCGAGCACAATGAAGGATTTCTTGAGCAGCTGTACCACGATCAGAAATTGTCATCTTCAAACATCTGTACGGAGCTCAACTATGATAGTGATATGACATTGAGTTCCATGATCAAACTAGAGTTCCTTTCTTCCTCGTCTCATGCTCCCCGTTGGCTTCAAGTCCTCCTCACCGACAAGTTCTACAACGCTTGCATAATTCACGAGGAGGCAAAGAAGAACGAAAAGAACGTGTATTGCTTGGATTGTTGCATCAGTCTCTGCCCCCACTGTTTGTCCCCTCACCGCTCTCATAGACTCTTGCAGATTAGAAGATATGTGTATCATGATGTTATAAGGTTGGATGACGCTGCAAAATTAATTGACTGCACTTCAGTTCAATCTTACACAACCAACAGTGCAAAAGTGGTATTTTTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCACTTCTGCTCCCTTTCTTGCAAGATCAATTATCTCGTCAGAACAACGGGTTCTCTCTCCGGTTACCTCTTCGAGTGCAACTACTTGCCCTTATCAGAATCTGGGCTCGACGATGGTCTGATGACCCCAGACTCGGTTCTCGAACCGGCCGGTTCGGCCCGAACCTCGTCAGGTTCAGGAGGGTATGGCGGGGTGGATTGCAGGACCACCCTGGCTTGCACTGCCACCACTGAGATTGTGAGGAAGAAGAGAACCGGCGGCTCTGGTTTCCGGCCACCGTGCAGACCGGCATGTTCGCCTGTGTCGGAAATCTCGGCGGGTCTGATGAACCGGAGGAAAGGGAACCCCCAGAGGTCCCCGCTGTATTGA 897 0.5017 MVRWCRSKGAGEHNEGFLEQLYHDQKLSSSNICTELNYDSDMTLSSMIKLEFLSSSSHAPRWLQVLLTDKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCLSPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYHFCSLSCKINYLVRTTGSLSGYLFECNYLPLSESGLDDGLMTPDSVLEPAGSARTSSGSGGYGGVDCRTTLACTATTEIVRKKRTGGSGFRPPCRPACSPVSEISAGLMNRRKGNPQRSPLY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01563 298 ProSiteProfiles Zinc finger B-box type profile. 70 113 IPR000315 GO:0008270
Phco3g01563 298 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 57 297 - -
Phco3g01563 298 Pfam PLATZ transcription factor 114 185 IPR006734 -
Phco3g01563 298 CDD Bbox2 75 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01563 Phco-Chr3 20089987 20095764 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco3g01563 PLATZ 3.6e-27 No_clan