Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01450 ATGGAGCTTGTGAATGACCAACAACAGCTGCAAAAACATTTTCATGTGTTGGTGGTTGATGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTTCTAAGAGATTCTTCCTGCAAAGCCACCTTCTTGGATTCTGGAGACAAGGCTTTGAAATATCTTGGCCTGCTAGATGATGAACTTGAAAATGTTTCCTCAACTTCTTCAGAGTCATTGCAGGAAAACGGAATGAAAGTGAACATGATCATGACAGACTACTGCATGCCAGGAATGAGTGGCTATGATTTACTGAAACGAATCAAGGGATCTTCTTGGAAAGATGTACCTGTCGTCATAATGTCATCAGAAAATGTACCATCTAGAATCACCATGTGCTTAGAAGGAGGGGCAGAGGAGTTTCTTCTGAAGCCTCTTCAGCCATCCGATTTAAAGAAGCTTCAACCATGCTTTTTAAAATCCTTTGATAATTCTAGTGAAGAAGATATATGTGCTGAAAGATCCTTAAGTTCTCGTAATGATATCAACAAAAGAAATCTGTATCCACAGCATGCTTTTAAATTGCAGTTTCTAACTACAATTGTAACTACAATGTTGAGATTTTGGAACTCTCTCTAA 612 0.3873 MELVNDQQQLQKHFHVLVVDDSVIDRKLLERLLRDSSCKATFLDSGDKALKYLGLLDDELENVSSTSSESLQENGMKVNMIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVIMSSENVPSRITMCLEGGAEEFLLKPLQPSDLKKLQPCFLKSFDNSSEEDICAERSLSSRNDINKRNLYPQHAFKLQFLTTIVTTMLRFWNSL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01450 203 SUPERFAMILY CheY-like 14 144 IPR011006 -
Phco3g01450 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 152 IPR045279 GO:0009736
Phco3g01450 203 SMART REC_2 14 146 IPR001789 GO:0000160
Phco3g01450 203 ProSiteProfiles Response regulatory domain profile. 15 150 IPR001789 GO:0000160
Phco3g01450 203 Gene3D - 15 174 - -
Phco3g01450 203 Pfam Response regulator receiver domain 16 144 IPR001789 GO:0000160
Phco3g01450 203 CDD REC_typeA_ARR 16 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01450 Phco-Chr3 15503286 15506003 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco3g01450 Response_reg 1.2e-19 CL0304