Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01403 ATGGACAGAGAATTGCAATGGACCCTAGTTTTAGCAATTTGTGCTTCATCACTCTTTAATATACTTGCTCAGAACACTCAACTCACTTACAGGAACCGTGCCATTGATTATTCAGGTGTTATAAGCATTGATTGTGGGGTAAACGAGAGCTACACCGACAAAACAACCAACTTACGGTATCAAGCAGATGATATCCAATTTGGTGAAATCTATAATACATCCTCAATTTGCAACATGAACGTAAGTCAAATTCATAAGCAGTTGAACACACTGAGAAGTTTCCCTTATGGGAAGAGAAATTGCTACACCTTGACACCCAAACAGGGAAAGAATAAGAAATACATAATCAGGGCTCACTTTGCATATGGCAACTATGACAACAAAAATGAAGGACCTGTTTTTGATTTGCATCTTGGAGTCAATTTCTTCAAGACAATAAACTCTACTGAGGCTGAGGTAATTCGAATCGAAGCAATTCATTTTGCCTCAACAGAAACAATCGATTTATGCCTTGTGAACACGGATCAAGGGGTGCCCTTCATTTCATTGTTGGAGCTATGGCCCTTGGACAATTCCATTTATCAAAGTTCTTCCACTTTGTTAACACTAGATCTCCTCACACGACTTAACCTTGGTGCCTCTGAAGATAACTTTATCAGGTACACAGATGATATATATGGAAGATCATGGGAAGTTTCAAACTATTATACCAAGAATCCATTGAAAACATCATCAGCTATTGATTTAGATAAACTTGTTGATCCTTACCAACTGCCAGCAGAAGTTTTGAGTTCTGCAGTGGAGGCATTAGATTCCAAGTCCTTGGAATTCACACCCAATTATACCATGGATTCTGAATATTATGTTTATCTTCATTTTTTTGACTTTGCGGATCGGACAAATAAACAAAAACGAAGATTGAATATTGTTATTAATGATTTTGATGATAAAAATGTGAAACAAGTTCTTACTCTTTCATACTGGAAGCCCAATAGCATAATTCTACCTATTAAACACGGGATGGGTATTCGGAAGATATCGATTGAAGCCGACACTGATTGTGAGTTACCTGCAATGCTTAATGCTCTTGAGATTTACAGAGTAGTACCTCAGTCAGATTCTTCCACACAACAAGAAGATGTTGATGCTATCTGGCACATCAAAGATGTTTATATGATCAATAAAATGAATTGGCAAGGAGACCCCTGTGGACCAAAGAATTTTACATGGGAAGGTGTGAAATGCAGCAATGGGAACACTCCAAGAATCATTTCATTAAACTTGAGCTCAAGCAAGTTGTCAGGAGAAATAGATTCCTCCTTCTCCAACCTCACATGTTTGGAGACTTTGGATTTGTCAAACAATGAATTGACAGGGGAGGTGCCAGAATCTTTTGCAGAACTGTCACAATTAAAGTTCCTTAACTTGTCCAAGAATATGCTCACAGGTTCAGTTCCTGAGAGTCTAAAGGCAAAGTCCTCTAACAACTCTTTGCAATTGAGTTTGGATGGAAATCTCCATCCCTGTCAGACAGGGTCATCCAAGAGCAACCACAAGTTTATTATTCCATTAGTTGCATCTATGACAGCGTTTGTTGTTGTGGTCCTCACAATATCTACCGTAGTTATGGTGATCTGGAGACTTAGAAAAAAGGGAAAAGTGATTTCTTCAATTTCTGTCAAAGATGAGCTACTGAAATCAACAAATCAAGTATTTTCTTTCTCAGAGATTGTTAGAATCACTAATAATTTCACAACAATTATTGGGAAAGGTGGATTTGGTAAGGTTTACCTAGGTACTTTAGAGTGTGAGAAAAGAGTTGCTGTGAAGATACTTTCTTCACCATCAGCACAAGGATATAAGGAATTTCAATCAGAGGCAAAACTATTGATGCATGTTCATCACAGAAACGTGGTTTCTCTTGTGGGATACTGTGATGAAGGTGACACTAGAGCACTTATCTATGAATATCTACCAGAAGGGAACCTCCTACAAAAATTATCAGATAAGAACCCGAGTTTTTTAGAATGGACGCAGAGACTTAAAATTGCTATGGATGCAGCAAATGGGTTGGACTATTTGCATAATGGATGTAAGCCACCAGTAATTCACAGAGATTTAAAAACATCCAACATCTTACTAGACGAAAATATGCATGCCAAGATTTCAGACTTTGGAGTGTCGAAAACTTTTGCCAATGACAGTGACACTTATGTCACAACTTACCCAGCAGGCACACCGGGTTACCTTGATCCTGAATTTTATTGCTCAGGGACTCTCAACAAAAAGAGTGATGTTTATAGTTTTGGGATAATCCTACTAGAATTAATCACTGGTCAACCAGCACTAAGAGGAACTCCAGAAAATCTGAGTTACATACTTCCTTGGGTTAACAATAAACTCAGAACAGGAAATATCCATGAAATAGTTGATCCAAGGTTACATGGAAAATACAATGGTGCTTCAGCATGGAAATTTATAGGGATAGCCATGTCATGTCTCCCTCAAGTTCCAATTCACAGGCCTGACATAGGGCACATAGCCCTAGAATTAAAGGACTGTTTGTCTCTTGAATTATCTCTTGAAAGGGCTGTGAGCAACGTGAGAGACACATTAGTCTTGAGTTCTAGGCAAATTGAGTTCCATTAA 2649 0.382 MDRELQWTLVLAICASSLFNILAQNTQLTYRNRAIDYSGVISIDCGVNESYTDKTTNLRYQADDIQFGEIYNTSSICNMNVSQIHKQLNTLRSFPYGKRNCYTLTPKQGKNKKYIIRAHFAYGNYDNKNEGPVFDLHLGVNFFKTINSTEAEVIRIEAIHFASTETIDLCLVNTDQGVPFISLLELWPLDNSIYQSSSTLLTLDLLTRLNLGASEDNFIRYTDDIYGRSWEVSNYYTKNPLKTSSAIDLDKLVDPYQLPAEVLSSAVEALDSKSLEFTPNYTMDSEYYVYLHFFDFADRTNKQKRRLNIVINDFDDKNVKQVLTLSYWKPNSIILPIKHGMGIRKISIEADTDCELPAMLNALEIYRVVPQSDSSTQQEDVDAIWHIKDVYMINKMNWQGDPCGPKNFTWEGVKCSNGNTPRIISLNLSSSKLSGEIDSSFSNLTCLETLDLSNNELTGEVPESFAELSQLKFLNLSKNMLTGSVPESLKAKSSNNSLQLSLDGNLHPCQTGSSKSNHKFIIPLVASMTAFVVVVLTISTVVMVIWRLRKKGKVISSISVKDELLKSTNQVFSFSEIVRITNNFTTIIGKGGFGKVYLGTLECEKRVAVKILSSPSAQGYKEFQSEAKLLMHVHHRNVVSLVGYCDEGDTRALIYEYLPEGNLLQKLSDKNPSFLEWTQRLKIAMDAANGLDYLHNGCKPPVIHRDLKTSNILLDENMHAKISDFGVSKTFANDSDTYVTTYPAGTPGYLDPEFYCSGTLNKKSDVYSFGIILLELITGQPALRGTPENLSYILPWVNNKLRTGNIHEIVDPRLHGKYNGASAWKFIGIAMSCLPQVPIHRPDIGHIALELKDCLSLELSLERAVSNVRDTLVLSSRQIEFH 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01403 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Phco3g01403 882 PANTHER OS07G0107800 PROTEIN-RELATED 41 855 - -
Phco3g01403 882 PRINTS Leucine-rich repeat signature 468 481 - -
Phco3g01403 882 PRINTS Leucine-rich repeat signature 447 460 - -
Phco3g01403 882 Gene3D Transferase(Phosphotransferase) domain 1 658 869 - -
Phco3g01403 882 SUPERFAMILY Protein kinase-like (PK-like) 567 848 IPR011009 -
Phco3g01403 882 Gene3D Phosphorylase Kinase; domain 1 564 657 - -
Phco3g01403 882 FunFam Lectin-domain containing receptor kinase A4.3 658 868 - -
Phco3g01403 882 Pfam Leucine rich repeat 425 481 IPR001611 GO:0005515
Phco3g01403 882 Pfam Malectin-like domain 43 368 IPR024788 -
Phco3g01403 882 Pfam Protein tyrosine and serine/threonine kinase 585 786 IPR001245 GO:0004672|GO:0006468
Phco3g01403 882 Gene3D Ribonuclease Inhibitor 386 502 IPR032675 -
Phco3g01403 882 SMART serkin_6 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01403 882 FunFam Leucine-rich repeat receptor-like protein kinase 559 657 - -
Phco3g01403 882 ProSiteProfiles Protein kinase domain profile. 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01403 882 SUPERFAMILY L domain-like 407 494 - -
Phco3g01403 882 CDD STKc_IRAK 588 852 - -
Phco3g01403 882 FunFam Leucine-rich repeat receptor-like kinase 379 510 - -
Phco3g01403 882 ProSitePatterns Protein kinases ATP-binding region signature. 588 610 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01403 Phco-Chr3 14335137 14345285 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phco3g01403 Malectin_like 4.5e-79 CL0202