Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01394 ATGGACGACCCTGATGTCCTCGACTTCTCCAATCGCAGCATCACCACCAGTGCTTCCTCCGAGGAAGACTGGACCAACCTGTGGTCCCCTATCGTCGATTGGGGATCCCTTGCCGCCGGCGAAGATAATTTTCAAACCCTATTTGACTCCATCGTCCATGAAGACGACGTCGTTCTGACCCCAGATCAAACCACAGCCCAAGACTCCGACTTAAGTGGTCATGATGAGAAGGGCCTCCGCCTGGTGCACCTCCTCATGGCGGCGGCGGAGGCCCTCACCACCGGCACCGAGAGCCACCACCTGGCTCGAGTGATATTGGTTCGGCTCAATGAGTTGGTGTCCACCACCCACGGCACCAACATCGAAAGACTCGCGGCGCACTTTAGCAGCGCACTCCAAAATCTGCTAGACGGCGCCGGGAGTGCGCACACCATAACAAACAACACCCCCAACCCCACGGAAACGCTCACCGCGTTCCACCTTCTCCAGGACATGTCCCCTTACGTCAAGTTCGCTCACTTCACCGCCAACCAGGCCATCTTAGAGGCCGTGGCCCACGAAAAACGGGTCCACATCGTCGACTTCGACGTCACAGAAGGGGCCCAATGGGCCTCCCTAATGCAGTCCCTTTCGTCAAGAAGCACCGGCCCACCAGGCCCACACCTTCGCATCACGGCATTGTCCAGAGGCTCGGCCTCGGGACGGAGATCCATTGCCACCGTTCAGGAAACCGGACGGAGGCTAACGGCGTTCGCGGCTTCCGTGGCCCAACCGTTTTCTTTTCACCAGTGTCGGTTGGACCCTGGCGAAACGTTTCGACCTTCGTTACTGAAGCTGATTCGCGGCGAGGCCTTGGTGTTTAACTGCATGCTGCACTTGCCGCACTTGAGCTTCAGAGCCTCAGGCTCGGTTGCTTCGTTTTTAAAAGGTGCGAAGGAGTTGAACCCGAGGGTGGTGATGGTTGTAGAGGAAGAGGTGGCGCGTGGTGGAGATGCGGGCTTTGTAGGCCTGTTTATGGATTCGCTGCAGCACTACTCCGCCGTGTTTGATTCGCTAGAGGTTGGGTTTCCGATGCAAAAATGGGCCCGGGCTTTGGTGGAGCGCGTATTTTTGGGCCCAAGAATTGCAAATTCTGTGGGCCTTATGTACCATAGTGGAGGAGAGGAGAGAGGGTCGTGGGAGGAGTGGTTGGGTGCGGCGGGGTTCAGGGGAGTTCCCGTAAGCTTCGCTAATCATTGCCAAGCTAATCTGTTACTAGGACTGTTTAACGATGGGTATAGAGTGGAGGAGCTGGGGAACAATAAATTGGTGTTGGGTTGGAAATCACGCCGTTTAATTTCAGCCTCTGTTTGGAGTTCAAACTCTTGA 1368 0.5621 MDDPDVLDFSNRSITTSASSEEDWTNLWSPIVDWGSLAAGEDNFQTLFDSIVHEDDVVLTPDQTTAQDSDLSGHDEKGLRLVHLLMAAAEALTTGTESHHLARVILVRLNELVSTTHGTNIERLAAHFSSALQNLLDGAGSAHTITNNTPNPTETLTAFHLLQDMSPYVKFAHFTANQAILEAVAHEKRVHIVDFDVTEGAQWASLMQSLSSRSTGPPGPHLRITALSRGSASGRRSIATVQETGRRLTAFAASVAQPFSFHQCRLDPGETFRPSLLKLIRGEALVFNCMLHLPHLSFRASGSVASFLKGAKELNPRVVMVVEEEVARGGDAGFVGLFMDSLQHYSAVFDSLEVGFPMQKWARALVERVFLGPRIANSVGLMYHSGGEERGSWEEWLGAAGFRGVPVSFANHCQANLLLGLFNDGYRVEELGNNKLVLGWKSRRLISASVWSSNS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01394 455 ProSiteProfiles GRAS family profile. 72 452 IPR005202 -
Phco3g01394 455 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 68 448 IPR005202 -
Phco3g01394 455 Pfam GRAS domain family 81 451 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01394 Phco-Chr3 14182209 14183576 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco3g01394 GRAS 2.8e-101 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01394 3 14182209 14183576 Phco3g01394 3 14182209 14183576 ECH