Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01382 ATGCCCTTGTTGCCTACGACCTCCACTCGTGCTGCCATCTTTTTCTTTACACCTCCCTCCGTTGAAGAAGGCGACGAGGAACGTGCCCTCGTGAACGACGTCGCAACAAACGACGAGATCAGGGACATACAAAATCCTAATAGTTGTTGTCTATTCCATAGCGTTAGTCTTCTTCAGCGGGGTAATGGAAGAACATCACCACGCACACGAGGAAAGTCCCATGCGGGGTTAGAAATGCAACATTCCATGGAAGACAACGCTAACCTCTCTCTCCCTCGCGACTCTTCCCCTTCCTCTCCGGAATTCTTCAAACAAGTCCAAGCTGCTCTCAAGCGCCATCGCCCTCTCGCTTCAACGCAATCGCATACCTTGAGGCCAAAGCGCTCCATGGTGGCGCACCGAAACATCGCGAACAAGTCCGAAGAGGAACCTCCGTCGATTTCGGACACCTGCACCGGTGAAGGTTGCAAGAACGAACCCTCTCTGCCGGTGGAATCTCAGAGTGTTGGTGCGCACAAGAAGGTTCGGTTTTCAACCGAGAGCAATAATGCCACTTCGCAGCCACAGGATAGGGCATCAATTGGATTCAATCAACATGTTAAACACCACAATATGCAGCAGGCAGAGTCTGAGACTGGTTTGTTATCTGAGGGAGGCAAGAGTTCTCTGCTTCCAAAGAGAAGAATAGTTACTCAGGATCATCTGCAGCAATTCAAAAACTTTTTGAGTCAACCAGCTACACAATCTTCCGCAGTGGGATTGCCATGTCCTACAACTACATCAGTCCATTCAACTTCAGCTCCAATGTTCAATTCTATAACTCATTGTTCTAATTCCTGTATGGATAGTGACTCGCATGTGGCTGCAGAACCTCATTATAACCTGAATGTCAATCCTCATCCTATAACACAAGGGGTTGTTAAATCACCATATGATTCTCTGAAGGATACCAATAGAATGTTAATTGATGCAGAGTTGACATTTAAGCAGAGTGATCTATCTAAGGAGCAACAAGGATGTTTGTTAAAGGAAACTAGTATTTCAAAATATACTTCTTGTTGTGATGACATGTTAAGTAGGGAAGAGTCTGCAGCTGTTACCAACATACTGCCTCAGGCTCTGACTTCATCTTCAAATACGAAGCTCGAATCTTCTAGCTTTGAAAAGCAAGCAAAAAAAGCAAGTTGTAAAGGAACTTCGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAGTAAAGATGGTAGAGTCAAGGATGATGGATACATATACATGGTGCTTGAATACGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTAGATGGCAACAACCAGACCATAGATGCGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCATTAAAACTGATTGATTTTGGAATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAACGTGATTCACAGTGGGAGTCTAGAGTATACAGTGACTTGGAAAAGGCTTTGCCTCTTGCGTTGATTCCTTAG 1623 0.4442 MPLLPTTSTRAAIFFFTPPSVEEGDEERALVNDVATNDEIRDIQNPNSCCLFHSVSLLQRGNGRTSPRTRGKSHAGLEMQHSMEDNANLSLPRDSSPSSPEFFKQVQAALKRHRPLASTQSHTLRPKRSMVAHRNIANKSEEEPPSISDTCTGEGCKNEPSLPVESQSVGAHKKVRFSTESNNATSQPQDRASIGFNQHVKHHNMQQAESETGLLSEGGKSSLLPKRRIVTQDHLQQFKNFLSQPATQSSAVGLPCPTTTSVHSTSAPMFNSITHCSNSCMDSDSHVAAEPHYNLNVNPHPITQGVVKSPYDSLKDTNRMLIDAELTFKQSDLSKEQQGCLLKETSISKYTSCCDDMLSREESAAVTNILPQALTSSSNTKLESSSFEKQAKKASCKGTSVTDKALFEGVINGSFSSKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGNNQTIDANWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQWESRVYSDLEKALPLALIP 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01382 540 Gene3D Transferase(Phosphotransferase) domain 1 420 532 - -
Phco3g01382 540 MobiDBLite consensus disorder prediction 201 220 - -
Phco3g01382 540 MobiDBLite consensus disorder prediction 141 165 - -
Phco3g01382 540 ProSiteProfiles Protein kinase domain profile. 327 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01382 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Phco3g01382 540 PANTHER MIXED LINEAGE PROTEIN KINASE 424 521 - -
Phco3g01382 540 MobiDBLite consensus disorder prediction 201 217 - -
Phco3g01382 540 MobiDBLite consensus disorder prediction 139 171 - -
Phco3g01382 540 SUPERFAMILY Protein kinase-like (PK-like) 422 518 IPR011009 -
Phco3g01382 540 SMART serkin_6 336 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01382 540 Pfam Protein kinase domain 422 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01382 Phco-Chr3 13971921 13981912 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Phco3g01382 Pkinase 4.1e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01382 3 13971921 13981912 Phco3g01382 3 13971921 13981912 ECH