Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01371 ATGGGCGTTTACCAGCTCTTATACTATCTTCCTCTGCCCCGCATTCACAAAAAACTATTCATTTTGTTTTCTTCACCTCTGGGAAAAGCTGAACACACTAAACATCGCGTTTCCCCAGTCCGACGACGTTTTAGATGGATTTGGCGAGTCATGAATCACCTACCTCGACTATTCGGCAATAGAAAAAAGCCCCCGACCATGGACCCCAAGAAGAGCAAGATGCGAGGCAAGAAGCAGCAGCCCAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTCGAATACGACGCCGGATCCTCCTCCTCGTTGCGGGGTGACTCCGCCTCCGTCTCGACGTCGTCTTCCTCGTCGTCTTCGCTCTACATTCGCTCCATGGACTTCTACGACCGCAGGAGCTTCCGAATCGAGGGTGTGGAGGGCGAGTTCGACCAGATTTGTCGCAGCCTCGGCCTCTCCGGTCCGGAGGACTTCTCCATTCCGGCCGCCACATGGGAGGCTATGAAGCTCCGCTCCTCCTCCGACATCCCGTCGCGCCGGAACCACGACGGGAAGGCGTTAAACGAGGAGGCGAAGGAGAAGGAGAAGGAGGAAATTGAAGCGGTTGAGAACGAGGATGGGGCTAGGGTTTTGGATGAGTGTGTTGTTCCTGCTGAGAGTAGTGGTTGCTGCTCCGCTGGCGGCGGCGGAATTAAGGGTTTTCGTCCTCCGATGCTGAAGCCGCCGCCGGGTGATAGGGTTTCGGTGGTGGACGAAACGTGTTCCACGTGGGATTTGTTGCGGGATTTTGCGCCGAAAGGGGAGGGAGGGAAGGAGAGTTACGTGGGGTTGAGTGGTTCTGATGAAGATGAAGATGAGGACCGAGAAGAAAAGCAGGACGAGGATGAGGAAGAAGGGGAAGTTGGTGGAGTGAGGGTGGAGAGAGAAGAGGAGGAAAACGCGGCGAGGATTGCGGATATTGTGGATGAGTTTTCAGGGTTTTCTACTTCGAACGAAGATGATTCCTCTAGCACTACCACGGGCCCTAATTCTAATAATATATCTCCTAATGGGAGAATCAAGCGTGTGATTTCCGCGGGTAACTGGCAGAAGGGTGATCTTTTGGGGCGTGGCTCGTTTGGCTATGTCTATGAAGGGATTTCTGAAGATGGGTTCTTTTTTGCTGTAAAACAAGTTTCACTACTTGATCAAGGGAATCAGGCAAGGCAAAGTGTATATCAACTGGAACAGGAAATTGCACTTTTGAGTCAATTTGAACATGAGAATATAGTTCAATACTTTGGCACTGAAATGGATGCGTCAAATCTGTATATCTTTATTGAGCTTGTAACTAAAGGTTCTCTTAGAGACCTCTACCAGAGATATACTCTTCGAGATTCTCAAGTATCTGCATATACAAGGCAGATTTTGCATGGTTTAAAGTATCTCCATGATCGAAACATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAGCTTTCAGATTTTGGATTGGCAAAGGCAATCAAATTAAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGTTGTAAGAGGTAAACAAAAAGGTTATGGGCTTCCAGCCGATATATGGAGTTTGGGATGTACTGTGTTAGAGATGTTAACTGGCCAATTTCCATACTATCACTTTGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGCGAGCTCCCCATTGTGCCAGAATCCCTTTCACGAGATGCACAGGATTTTATCCTGCAGTGTCTCAAAGTTAATCCAGATGAACGTTCCACTGCTGCTAAACTCTTAAATCATACCTTTGTCCAAAGGCCGCTACTTTCCCAGTCCTCTGGTTCTGCATCTCCTTATATTCGAAGGAGTTAA 1899 0.4829 MGVYQLLYYLPLPRIHKKLFILFSSPLGKAEHTKHRVSPVRRRFRWIWRVMNHLPRLFGNRKKPPTMDPKKSKMRGKKQQPKLERRNAAKHFEYDAGSSSSLRGDSASVSTSSSSSSSLYIRSMDFYDRRSFRIEGVEGEFDQICRSLGLSGPEDFSIPAATWEAMKLRSSSDIPSRRNHDGKALNEEAKEKEKEEIEAVENEDGARVLDECVVPAESSGCCSAGGGGIKGFRPPMLKPPPGDRVSVVDETCSTWDLLRDFAPKGEGGKESYVGLSGSDEDEDEDREEKQDEDEEEGEVGGVRVEREEEENAARIADIVDEFSGFSTSNEDDSSSTTTGPNSNNISPNGRIKRVISAGNWQKGDLLGRGSFGYVYEGISEDGFFFAVKQVSLLDQGNQARQSVYQLEQEIALLSQFEHENIVQYFGTEMDASNLYIFIELVTKGSLRDLYQRYTLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLSDFGLAKAIKLNDVKSCKGTAFWMAPEVVRGKQKGYGLPADIWSLGCTVLEMLTGQFPYYHFECMQALFRIGRGELPIVPESLSRDAQDFILQCLKVNPDERSTAAKLLNHTFVQRPLLSQSSGSASPYIRRS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01371 632 MobiDBLite consensus disorder prediction 99 114 - -
Phco3g01371 632 MobiDBLite consensus disorder prediction 277 298 - -
Phco3g01371 632 Coils Coil 183 203 - -
Phco3g01371 632 Pfam Protein kinase domain 361 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01371 632 FunFam Mitogen-activated protein kinase 1, putative, expressed 358 626 - -
Phco3g01371 632 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Phco3g01371 632 MobiDBLite consensus disorder prediction 299 316 - -
Phco3g01371 632 ProSiteProfiles Protein kinase domain profile. 360 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01371 632 MobiDBLite consensus disorder prediction 322 349 - -
Phco3g01371 632 Gene3D Transferase(Phosphotransferase) domain 1 357 628 - -
Phco3g01371 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Phco3g01371 632 MobiDBLite consensus disorder prediction 57 114 - -
Phco3g01371 632 SUPERFAMILY Protein kinase-like (PK-like) 348 619 IPR011009 -
Phco3g01371 632 MobiDBLite consensus disorder prediction 172 202 - -
Phco3g01371 632 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 84 627 - -
Phco3g01371 632 MobiDBLite consensus disorder prediction 259 349 - -
Phco3g01371 632 SMART serkin_6 360 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01371 Phco-Chr3 13642379 13651326 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco3g01371 Pkinase 3.9e-67 CL0016