Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01355 ATGGGTCCCGTTGAATGTTTCAAGTCTATTGAGGAAAATGTTCAAAAGATGATAAAGGAGAGCATAACCTACAATAGGTCATCAAACACTCTAACAAAGAAAAGACATGCAGCAAAAGCCCTTGTTAAAGAAATCAACAAAAGGAAAAGGACATCCTTCAAAAGTCATTCAAAGAGAAAAACTACAACAGAGACAAAGGCACTAAAAAAGGCCGCACCATCCCTAGAGGTGAGCATTCTTGAATCTCCTCCTCAACCAACCACCCTTTTAGAAACTAAGGCTACCTCTGCTTGGCAAGAAAATCTTGCACAACATTCTTCTGAAGCCTCTACCTCTAGAGACAATGATGATGTCATCGCTTTAGGAGAAGAAGAAGAAGAGGATGATGCCCAATTTAATACAATAGAAGTTGATCCTATTAATCAAGCAAACAACTCTGGCCCAGAGAACAGAGGAGGTGAGGATAGAGACAAGGAGGGTCGAAAAGGGGAGTCTCTTAGTCCGGTGGAACAGCCGAAGATAGGAAAGGCGGAGGCAATGCAGTGTACCCAGGGTAGTGCTAGTGGAGAACTAAGATCGGCGACCAAACCAGAGGGCTCCGAAAATAGTTGTCATCTTCATCGGTGCAGCAATGAAGGTAGTTTGCCATATCAACACGAGGGTCCCCAAACCAGTTGTATCAATTGGGACTGTGAAGAGGGAGGCGGGGACAGCGTAGGAGTGGAGAACAGCTTCGAATCCAATGGGGAGGAAGGTGCAGTCGAGGTAGATGGGAGCAAAACATCCATGAAAGATCAAAGGTTGGTGAGGTACAATCATGTACAGGAATTGCAGAGTGGTGGTGAAGGTCTTAATGTTACAATTTTGGAAATGGTGGTCGGACGGTGCGCCATCGATGACGTAAGACACTTCGTCCTCACCAATTTTCACATTCTTCGGCCCCAGTCGAAACACAAGTTGAGCCGGAGCGAAGGGGGTTCCGAGAGATTTGAAAGTTTCGGAAGTGGAGGAAATGGCGGCGGCGGTGGCAGTGTTAATGATGTTATCGGCGACGGTTTAGCGGCAAGTGCGGCAGATTTCGTCTTCAATTTCATGGATTGTTCAGTGGCACTGGATAATCTTCTCAGGCATAAGCCAGAAATGGATATCACATTTGAGTCTTCTGCCAGTCCGCAGCATAAAAAGATATCAGCCAGATGGGACCCGGTTGAAGCATATCGGCCTATAATTGATGAGGCCCCTGTGTTCTATCCAACTATTGAGGAGTTTGAAGACACACTTGGTTACATAGCTAAGATTCGCCCCCAAGCTGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGCTGGGTACCACCATTCCCTCTTAAGGAGAAAGATTTATGGGAAAATGCAAACTTTCCCACTCGTATCCAGCAAATTGATTTGCTTCAGAACAGGGAGCCCATGAGAAAGAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAAGCAATCAAAGATGGGTACAGGTAGGAGAACTGCCAAATCAGGTTCTGAAGCTAATGGTGCTTCTGAGCCTGAGGAGAAGTTTGGATTCCAATCAGGTTCAGACTTCACACTTAAAAGACTTTCAGCAATATGCGTAGGTTTTTAA 1635 0.455 MGPVECFKSIEENVQKMIKESITYNRSSNTLTKKRHAAKALVKEINKRKRTSFKSHSKRKTTTETKALKKAAPSLEVSILESPPQPTTLLETKATSAWQENLAQHSSEASTSRDNDDVIALGEEEEEDDAQFNTIEVDPINQANNSGPENRGGEDRDKEGRKGESLSPVEQPKIGKAEAMQCTQGSASGELRSATKPEGSENSCHLHRCSNEGSLPYQHEGPQTSCINWDCEEGGGDSVGVENSFESNGEEGAVEVDGSKTSMKDQRLVRYNHVQELQSGGEGLNVTILEMVVGRCAIDDVRHFVLTNFHILRPQSKHKLSRSEGGSERFESFGSGGNGGGGGSVNDVIGDGLAASAADFVFNFMDCSVALDNLLRHKPEMDITFESSASPQHKKISARWDPVEAYRPIIDEAPVFYPTIEEFEDTLGYIAKIRPQAEPYGICRIVPPACWVPPFPLKEKDLWENANFPTRIQQIDLLQNREPMRKKSRGRKRKRRKQSKMGTGRRTAKSGSEANGASEPEEKFGFQSGSDFTLKRLSAICVGF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01355 544 MobiDBLite consensus disorder prediction 124 202 - -
Phco3g01355 544 PANTHER LYSINE-SPECIFIC DEMETHYLASE 410 536 - -
Phco3g01355 544 SMART JmjN_1 412 453 IPR003349 -
Phco3g01355 544 Pfam jmjN domain 414 447 IPR003349 -
Phco3g01355 544 MobiDBLite consensus disorder prediction 48 86 - -
Phco3g01355 544 MobiDBLite consensus disorder prediction 485 503 - -
Phco3g01355 544 MobiDBLite consensus disorder prediction 478 527 - -
Phco3g01355 544 MobiDBLite consensus disorder prediction 150 166 - -
Phco3g01355 544 ProSiteProfiles JmjN domain profile. 413 454 IPR003349 -
Phco3g01355 544 MobiDBLite consensus disorder prediction 135 149 - -
Phco3g01355 544 MobiDBLite consensus disorder prediction 181 202 - -
Phco3g01355 544 Gene3D Cupin 398 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01355 Phco-Chr3 13440647 13455790 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phco3g01355 JmjN 1.2e-16 CL0029