Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01286 ATGAATCAAAACCAGCTTCAGCCCCTGCCTCTGCTTAGTAGCTTCCTAGGTTCATCTCCCCAAGACGCTTTGCTACAAAACCAAAACCCTAAAGCATACCATGGTCAAGTTGAGGATGTCACTGTGGCCTTACACATAGGCCTCCCCAACAATTCAAGTGGCTCCACCAATAATCATGGATTTGTGAATGCTACTACTCATGCTCCTAGCAACTACTGGATACCAACTCAAGAACAGATCCTCATTGGCTTTAGCCATTTCTCTTGTCCCGTCTGCCTCAAAACCTTCAACCGCTACAACAATCTTCAGATGCATATGTGGGGGCACGGGTCACAGTATCGCAGAGGACCAGACTCGCTGAAGCGAACTCATCCACGACCCTTGTTGGACATTCCCTGCTACTGTTGCTCCAGAGGGTGCAAGAACAACATCGACCACCCACGTGCGAAGCCTCTCAAGGACTTTCGCACGCTTCAGACACACTTCAAGAGGAAGCATGGCGCCAAGCCCTTCACATGCCGCAAGTGCGCCAAGCCTTTGGCCGTGAAAGGTGACTGGCGAACCCACGAGAAAAACTGCGGCAAACGCTGGCTTTGCATTTGTGGCTCGGACTTCAAACATAAGAGGTCCCTGAAAGATCACATCAGAGCCTTTGGCTTTGGTCACACCCCTTTCACTTCTTCTTCGGATGCCATGTAG 699 0.505 MNQNQLQPLPLLSSFLGSSPQDALLQNQNPKAYHGQVEDVTVALHIGLPNNSSGSTNNHGFVNATTHAPSNYWIPTQEQILIGFSHFSCPVCLKTFNRYNNLQMHMWGHGSQYRRGPDSLKRTHPRPLLDIPCYCCSRGCKNNIDHPRAKPLKDFRTLQTHFKRKHGAKPFTCRKCAKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIRAFGFGHTPFTSSSDAM 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01286 232 Gene3D Classic Zinc Finger 149 219 - -
Phco3g01286 232 PANTHER ZINC FINGER PROTEIN WIP2 9 226 IPR043584 GO:0003700|GO:0010468
Phco3g01286 232 Gene3D Classic Zinc Finger 86 109 - -
Phco3g01286 232 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Phco3g01286 232 FunFam zinc finger protein WIP2-like 86 109 - -
Phco3g01286 232 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Phco3g01286 232 SUPERFAMILY beta-beta-alpha zinc fingers 82 109 IPR036236 -
Phco3g01286 232 FunFam Zinc finger protein WIP2 140 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01286 Phco-Chr3 12034949 12036082 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco3g01286 zf-C2H2_6 6e-05 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01286 3 12034949 12036082 Phco3g01286 3 12034949 12036082 ECH