Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01247 ATGCGATCACCGAATGAGATGAAAAAGAAACGAAAAGAAAGCGAGGCCAGCGAGTGGTCGAACTTGCCGGAGGTTTCGAAGTCGCATTGCTCGCTAGAGCGTGGTCCGAGGTTTAACAAACGGTGCAGGGAAGACTGCGTGGCCACGGTTCCCACTCGAGGCGCGTCGTCACTTTTGACCGCGTCACGGGGATTGAAGCGGAAGATAGGGTGCATTGACAAGGCCACGCGGATGGGAAGGAGCGTGAGGATCGAGTACGATTACGTTACAGGGCAGAGCACGATCGGTCAGGGGAAGTTCGGGTCGGTGACAGTTTGCCGCGCACGTGCGGGGGGCGTGGAGTACGCGTGCAAGACTCTGAGGAAGGGGGAGGAGACGGTGCACCGGGAGGTGGAGATAATGCAGCACGTGTCGGGTCACCCTGGGGTTGTAACTCTGAAAGCGGTGTATGAGGATGCGGAGTGTTGGCACCTTGTGATGGAGTTGTGCACCGGGGGTAGGTTGGTTGATAGGATGCGGGAGGGGCCGTGTTCGGAACACATGGCGGCTGGGATACTGAAGGAGTTAATGATGGTTGTTAAGTATTGTCATGATATTGGCGTGGTGCATAGGGATATTAAGCCCGAGAATGTTCTGATTACTGGAACTGGGAAGATTAAGCTTGCTGATTTTGGTCTCGCCATCCGAATTTGTGAGGGTCAGAGTTTGACAGGTGTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCTGGGGTGCTCCTGCATGCTTTGTTGGTTGGTTTTCTTCCATTTAAAGGCGATTCACAGGAGGCACTTTTTGAGGAAATAAAAAATGTCAAACTAGATTTCCAAACGGGGGTGTGGGAATCGATATCTAAACCTGCTCGAGATCTTCTTGGGAGAATGTTGACAAGAGATGTTTCAGCAAGGATAACAGCTGATGAAGTACTGAGTCATCCATGGATATTGTTCTATACGGCGCAAACATTGAATATGCTGCCCGTTAAATCAAAATTGAAACCCCAAAATGCAGCTATTTGCCACAAGTCTGTTACTGCACCTGAATCTGGGTTTGGAGGATACAGGATGGATAATTGTTCCCTAAATGGTTCAAGCACGTTTTCATCCTCTGAAAGTTGCAATTCGGAATATCATGATGACTGTGAGTGGATTGATGCACTTACCACTGCTGTTTCACATGTGACGATATCCGAAGCTAAGAGGACCAAGTTGTGGGGTCCCACTGGTCCAATTGATCCACAAGGTTCATCTAACTTGAAGACTAACCTCTGTAAAGCATTCTGA 1347 0.4944 MRSPNEMKKKRKESEASEWSNLPEVSKSHCSLERGPRFNKRCREDCVATVPTRGASSLLTASRGLKRKIGCIDKATRMGRSVRIEYDYVTGQSTIGQGKFGSVTVCRARAGGVEYACKTLRKGEETVHREVEIMQHVSGHPGVVTLKAVYEDAECWHLVMELCTGGRLVDRMREGPCSEHMAAGILKELMMVVKYCHDIGVVHRDIKPENVLITGTGKIKLADFGLAIRICEGQSLTGVAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGFLPFKGDSQEALFEEIKNVKLDFQTGVWESISKPARDLLGRMLTRDVSARITADEVLSHPWILFYTAQTLNMLPVKSKLKPQNAAICHKSVTAPESGFGGYRMDNCSLNGSSTFSSSESCNSEYHDDCEWIDALTTAVSHVTISEAKRTKLWGPTGPIDPQGSSNLKTNLCKAF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01247 448 ProSiteProfiles Protein kinase domain profile. 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01247 448 MobiDBLite consensus disorder prediction 1 20 - -
Phco3g01247 448 CDD STKc_CAMK 87 335 - -
Phco3g01247 448 MobiDBLite consensus disorder prediction 1 18 - -
Phco3g01247 448 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 356 - -
Phco3g01247 448 Gene3D Phosphorylase Kinase; domain 1 91 168 - -
Phco3g01247 448 SUPERFAMILY Protein kinase-like (PK-like) 91 374 IPR011009 -
Phco3g01247 448 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Phco3g01247 448 SMART serkin_6 89 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01247 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Phco3g01247 448 FunFam Maternal embryonic leucine zipper kinase 85 366 - -
Phco3g01247 448 Pfam Protein kinase domain 92 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01247 448 Gene3D Transferase(Phosphotransferase) domain 1 169 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01247 Phco-Chr3 11340636 11343638 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco3g01247 Pkinase 2.5e-64 CL0016