Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01237 ATGCTCTACCTCACTTGCAATGCCGACACCGCAATAGCCATATGCCACCCTCACTCCCTCAAGAAGAACAAAAAGCCCATAAGCCCAACACAGGCCCACACCCTGCCACACTTCGCCTACTCCGACATCCTCGCCGCCACCAACGCCTTCTCCGCTCACACCTTCTTAGGCAAAGGCGGCCACGGCAGCGTCTACAAAGCTACCCTCCACGGCGGCGCCCTCATCGCCGCCGTCAAAAAAACCAAATCCTCCAACGAGATCGAAATCCTCTCCCACGTCAAAAGCCCGCGCTTGGTCAACCTAATTGGCCTCTGCAACGACCAAACTAACTGCAATATTAACAAACTCATTGTTGTGGAGTACATGCCCAACGGTTCGCTCCATGACCTTCTCCACTCCACCAAAACCGTTGGGTCCCCCGGTTGGACCGCGCGTGTTCGGTTCGCGGTTCACGTCGCGATAGCGGTTCGCTTTTTGCACTCGTCCGAACCGCCCGTTATTCACCGTGATATTAAATCGTCCAACGTGTTAATCGATGAGAAGTGGAAGGCGCGACTCGGTGACTTCGGACTCGCTTTTAGAGGACATGTGGCGGATTCTCGCGTGCCGCCAGCGGGGACGTTAGGGTACCTCGACCCCAGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGTGATGTCTTCAGTTTTGGAATTTTGCTGCTCGAGATTGCGAGTGGGAGGCACGCGATTGACGTGAGGCACAGTCCGCCGTCGTTGTTGGATTGGGCGATGCCATTGGTCCGCCGTGGGGAGTTTCGGGAGATTTGCGACCCGCGGATCGGAACGCCACCGGACATGGCGACGTTCCGGAGGATGATGGTGCTGGCGGCGAGGTGCGTTATGTCAACTGCGGAGAGACGGCCGACGATTGCGGAGGTGGTGGAGTGTCTGACGGCTGCGAGGAAGAATTTTGAGGCGCCGGTGATGTGGTTGAGAATGACAGGGCGTGTAGTGAAGGCGCGTGGCTATCCCATCCCTGAGTGA 1026 0.5741 MLYLTCNADTAIAICHPHSLKKNKKPISPTQAHTLPHFAYSDILAATNAFSAHTFLGKGGHGSVYKATLHGGALIAAVKKTKSSNEIEILSHVKSPRLVNLIGLCNDQTNCNINKLIVVEYMPNGSLHDLLHSTKTVGSPGWTARVRFAVHVAIAVRFLHSSEPPVIHRDIKSSNVLIDEKWKARLGDFGLAFRGHVADSRVPPAGTLGYLDPSYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSLLDWAMPLVRRGEFREICDPRIGTPPDMATFRRMMVLAARCVMSTAERRPTIAEVVECLTAARKNFEAPVMWLRMTGRVVKARGYPIPE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01237 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Phco3g01237 341 SUPERFAMILY Protein kinase-like (PK-like) 26 311 IPR011009 -
Phco3g01237 341 PANTHER OS01G0253100 PROTEIN 30 313 - -
Phco3g01237 341 Pfam Protein kinase domain 53 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01237 341 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01237 341 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Phco3g01237 341 Gene3D Transferase(Phosphotransferase) domain 1 122 323 - -
Phco3g01237 341 ProSitePatterns Protein kinases ATP-binding region signature. 56 80 IPR017441 GO:0005524
Phco3g01237 341 ProSiteProfiles Protein kinase domain profile. 50 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01237 Phco-Chr3 11191624 11192649 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phco3g01237 Pkinase 6.6e-35 CL0016