Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01219 ATGTTCTCAAAACTTCATCCGCAACACCAACCTTTTCAATTCTCCCGAGAATGTCAAACATCCGAGGACGATGACAGCCGGAGTAGCGGTGGACCCAACCTCGCCGCACAGAAGCCCGGCTCCACAGGCGATGGAGCTACAATTGAAGTAGTGCGGCGGCCCAGGGGCCGCCCTCCCGGCTCCAAAAACAAGCCCAAGCCGCCTCTTATTATTACCCGCGAGCCCGACCCCGCCATGAGCCCCTTCATTTTAGAAATCCCTGGCGGGAACGACGTCGTCGATGCCCTAGCCCGGTTCAGCCGCAGAAAGAACACGGGCCTCTGTGTCCTCACCGGTTCGGGAACCGTCGGTAACGTCACTCTCCGCCAACCCTCCGTCGCTGCTGTCGGCACCGTTACCTTCCACGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCACGCCCCCCCGCCGCCTGCCCCTCTCTCCACCTTCACCGTCTCGCTTGCCGGACCGCAGGGGCAGATCGTCGGCGGACACGTCGCTGGTAGGCTTATCGCTGCTGGGACGGTCTTCATCATCGCCGCGTCGTTCAACAACCCCTCCTTCCACCGGCTGTCGTCGGAGGACGACGCGCTGAATAACTCCGCGTCCGCCGGCGGCGGCAGAGATGCCCAGTCGCCGCTTGCCTCAGGTGGTGGCGCAGAGAGCGGACAACTTCCGGCGGAGTCGTGTATGTACAGCTGTCACCTCCCTTCGGATGTGATTTGGGCTCCAACGGCTAGACCACCTTTCTGA 786 0.6234 MFSKLHPQHQPFQFSRECQTSEDDDSRSSGGPNLAAQKPGSTGDGATIEVVRRPRGRPPGSKNKPKPPLIITREPDPAMSPFILEIPGGNDVVDALARFSRRKNTGLCVLTGSGTVGNVTLRQPSVAAVGTVTFHGRFDILSMSATFLLHAPPPPAPLSTFTVSLAGPQGQIVGGHVAGRLIAAGTVFIIAASFNNPSFHRLSSEDDALNNSASAGGGRDAQSPLASGGGAESGQLPAESCMYSCHLPSDVIWAPTARPPF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01219 261 MobiDBLite consensus disorder prediction 1 17 - -
Phco3g01219 261 MobiDBLite consensus disorder prediction 1 75 - -
Phco3g01219 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 207 - -
Phco3g01219 261 PIRSF ESCAROLA 2 252 IPR014476 GO:0003680
Phco3g01219 261 Gene3D - 80 214 - -
Phco3g01219 261 MobiDBLite consensus disorder prediction 210 233 - -
Phco3g01219 261 FunFam AT-hook motif nuclear-localized protein 80 213 - -
Phco3g01219 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 196 IPR005175 -
Phco3g01219 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 223 IPR014476 GO:0003680
Phco3g01219 261 CDD DUF296 81 194 IPR005175 -
Phco3g01219 261 ProSiteProfiles PPC domain profile profile. 76 215 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01219 Phco-Chr3 10860349 10861134 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01219 3 10860349 10861134 Phco3g01219 3 10860349 10861134 ECH
Phco3g01219 3 10860349 10861134 Phco7g01584 7 15113594 15114745 PCT