Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01212 ATGGCTAGAGAGGTTAACAAACATGGCAAGGTTAAGGTTCCTTTCAGCGAGGAAGACGCTGCTTCTCTACTGCAAAGATACGATGCACGAACTCTTTTGACGTTGCTTCAGGAATTGGCCAATTATCCGCATTCCAAGTTTAACTGGAATGATTTGGTAGCCAAAACTTCAACAGGAATTTCTAACGCTAGAGAGTATCAGATGCTGTGGCGGCATTTGGCGTATGGTCACTCCATAGAAAATTTGGATCACGATGCTCAACCTTTGGATGATGACAGTGACTTGGAGGGTGAACGAGAAGCATTACCCCGCTTAAAGAGGGAAACAGCAGAAGCTACAGCATTTGTTCAGGTAATCGTTGCATCTTTTAAGCTGAGTGAATCCACTCCTACTAGCTCGGTGATTCAAGCTCCATTGATTATAAATGCTCCAAAGAGTGATTCATCTACCATTGCTAACAAGGAAAGTTCGAGGACGCAAGATACAGACATTATTTTTCCAGTAACAGTCAAGAGACAGACACTTCCAAATGCATCATCAGCAAGAGTTGTGGAAGCCAGTGGTTCAGTTAGTGGCAACACATCCATTAAAAAGAAAAGAGAACCATGGTCAGAGCAAGAGGACATGCAATTACGAGATGCTGTTCAGAGGTGGGGTGAAGGTAATTGGGCAAGTATGATTAAAAGAGACGACTTTCCTATCAAGAGGAGTACCTCACAGTTATCTAAGAGGTGGAGCACATTACGAAAGAGAGAAGGCGACATCAATTGA 771 0.4319 MAREVNKHGKVKVPFSEEDAASLLQRYDARTLLTLLQELANYPHSKFNWNDLVAKTSTGISNAREYQMLWRHLAYGHSIENLDHDAQPLDDDSDLEGEREALPRLKRETAEATAFVQVIVASFKLSESTPTSSVIQAPLIINAPKSDSSTIANKESSRTQDTDIIFPVTVKRQTLPNASSARVVEASGSVSGNTSIKKKREPWSEQEDMQLRDAVQRWGEGNWASMIKRDDFPIKRSTSQLSKRWSTLRKREGDIN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01212 256 ProSiteProfiles Myb-like domain profile. 195 249 IPR001005 -
Phco3g01212 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 253 IPR017930 -
Phco3g01212 256 Gene3D - 193 254 - -
Phco3g01212 256 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 6 256 - -
Phco3g01212 256 Pfam Myb-like DNA-binding domain 200 248 IPR001005 -
Phco3g01212 256 SUPERFAMILY Homeodomain-like 197 250 IPR009057 -
Phco3g01212 256 SMART sant 199 251 IPR001005 -
Phco3g01212 256 CDD SANT_TRF 202 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01212 Phco-Chr3 10733328 10742419 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco3g01212 Myb_DNA-binding 7.1e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01212 3 10733328 10742419 Phco3g01212 3 10733328 10742419 ECH
Phco3g01212 3 10733328 10742419 Phco7g01064 7 8788841 8797114 PCT