Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01202 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAATTCCCGGAAAGAGGCTTGGATGAGTCTTCCAAGCAGAGATTGGATCACGAGAAGAGAAAAATCGTCAACTCAATCAAATCATCGGATACGACTTTTTCCTATGAAAGCGACGCGCCCATAAAGCCAACACCGATTCCCACGCCTGCCGCCAAAGACAACCACGACGTCGTTTTCTCATCCGGTAAGCAATCCGCGGTCTCCGACCTCTTCACCGGCGCCGACAAGTTCCGCACCAAGCAGAAGCAAATCGCCGCCTTCTGCGATTGGTTGATCGACAAAAAGAAGGACCGCAATCGACCGAGTCACCATTTAAAGCCCTATCCAACCGACGACGACGACGAAGAAGATGAACGTGAGCTTCTACTTCCGACGCCGCCGCCTCCGGCGGCGGCTGCAGCGGCGCAAGTGGTGAAGGATGCCGTTGACCGGAGCTTCGACCGGCAGGTTTCGCTTCCGAGGTTGTCCAGCGGGAGCAGCTACGCCGGGAGCTTGTTCACGCTGGACGGCACCGCCACATTCTCCAGCGACGTTACGAAAGACGAAACGTCGTCGTTTCAAGTCTTCACTGAAGAAGACGCGAGAAAAAGGAAAGAAGAAGGGGAAGAAAACATAAAACGCAATACCGCGCAGAAGTATAAGGAGAGCTACTACCTTCAACTGGCGTTGGCGCAGAGACTCTCCTGTTTAGCAAGCCTCGCTTCTGAACCTGTTCTCACACTCGACGCTGGTCCCGAAACATGGGACGCTGAATCCGTTTCGTATCGTTTATGGGTGAGTGGGTGTTTGTCGTACACGGACAAGATATCTGACGGTTTTTACAACATATTGGGGATGAATCCGTACCTTTGGGTGATGTGCAATGATGTGGAGGAAGAAGGGAAGCGTTTACCGTCTCTGATGGCGCTTAAGGCGGTTGAACCGAGCGACACTTCCATAGAGGTGGTTCTTTTCGATAGACAGGAGGACTCTCGGCTTAAGGAGCTTCAAGATAAAGCTCAGGAGTTGTATTCTGCTTCGGAGAACGCGTTGGTGCTGGTGGAGAAACTCGGAAAACTCGTTGCTATATGCATGGGGGGTACGTTCCCAGTGGAGCAAGGAGATCTACACAAGCGGTGGAAGTTGGTTAGCAAGAGGTTGAGGAACTTTCACCAATGTGTTGTGCTTCCTGTTGGTAGCTTGTCCAGTGGTCTCTGCAGGCATCGCGCGATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGCATTGCTCGAGGTTGTAGGTACTGTGTTTCAGATCATAGATCGTCTTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGAGAATATGTAGTTGATCTGGTTGGGGAACCAGGAAATATCCTTGGGCCAGATTCCTCAATTAACGGAGCATATGCCTCATCAATACCTTCCCCGTTTCAAATTTCTCATTTAAAAGAATCCCAATCTCCATATGTGGATGTTACAGCATGTTCTCAATCTCTTGATAACACTTATTCAGGCTGTGTACACGAAGATCAACGAGTTGAAGAAAATGATCGACTGAAAAATAGTAATGGCTCTATTTATGCTTCAATAGATCAAACTCGTGGAGGTACAGAACAACCTCTATTTCCCTGTGGCTTGAAAGGGAATGATGAGGAATGTGCTGTTCTGGGTTTATTAAAATTTCCTGCCATCTATGAAGGTGTTTCTGAAGATCTTGACCAAGTCTCTGGAGCATCGATACATGAGTACCCAAGGCTCAGAAAAGATTCAGTTGTAGTTATGGAAGCTTCCAAAGAGATCGTTGTAAAGGGAAGTTCAGGGCTAAAAAGTATCTATAAGCAATCTATACTGAGCTCATCTACCGAATCAGAAAAGGAACACGTAAAAAATAAACATGAAAATCAGGGTGCTGGTAATATTCCAAGATACTTGAACCTTGAACCATCACTTGCAATGGACTGGCTTGAGATACCGTGGGACGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGAACAGTGTACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCAGGATGATCAGTTGAAAGAATTTCTGAGAGAGGTTGCCATAATGAAACGAGTACGTCATCCAAATGTGGTGCTTTTCATGGGTGCAGTTACTAAACGTCCACATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTCCGCCTAATACATAAGCCAGCATCCGGTGAAATTCTAGATCCAAGGAGAAGGTTACGGATGGCTTTAGACGTGGCTAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCAATTGTGCACTGGGATCTCAAAACCCCGAACTTGTTAGTGGACAGAAATTGGACTGTCAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCTTATCATCAAAATCTGTCGCTGGAACTCCTGAGTGGATGGCTCCAGAATTTCTTCGTGGCGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGGGTTATCCTGTGGGAACTTGTGACCCTGCAACAACCGTGGAATGGACTTAGTCATGCCCAGGTAGTGGGAGCTGTGGCCTTCCAGAATAGGAGGCTTGCTATCCCTCCAAACATTTCCCCAGCGTTGGCCTCTCTGATGGAATCTTGTTGGGCTGATAAACCTGGTGATCGGCCATCATTTTCAAGCATAGTTGAATCTCTAAAGAAACTACTGAAGTCACCAGCGGATGCGATTAAAATGGGTGGAAAATAA 2835 0.4691 MPHRATYFFPRQFPERGLDESSKQRLDHEKRKIVNSIKSSDTTFSYESDAPIKPTPIPTPAAKDNHDVVFSSGKQSAVSDLFTGADKFRTKQKQIAAFCDWLIDKKKDRNRPSHHLKPYPTDDDDEEDERELLLPTPPPPAAAAAAQVVKDAVDRSFDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDVTKDETSSFQVFTEEDARKRKEEGEENIKRNTAQKYKESYYLQLALAQRLSCLASLASEPVLTLDAGPETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPSLMALKAVEPSDTSIEVVLFDRQEDSRLKELQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVSDHRSSCLVKIKDDRQLSREYVVDLVGEPGNILGPDSSINGAYASSIPSPFQISHLKESQSPYVDVTACSQSLDNTYSGCVHEDQRVEENDRLKNSNGSIYASIDQTRGGTEQPLFPCGLKGNDEECAVLGLLKFPAIYEGVSEDLDQVSGASIHEYPRLRKDSVVVMEASKEIVVKGSSGLKSIYKQSILSSSTESEKEHVKNKHENQGAGNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRLAIPPNISPALASLMESCWADKPGDRPSFSSIVESLKKLLKSPADAIKMGGK 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01202 944 Coils Coil 202 222 - -
Phco3g01202 944 Gene3D Transferase(Phosphotransferase) domain 1 753 940 - -
Phco3g01202 944 FunFam Serine/threonine-protein kinase CTR1 753 938 - -
Phco3g01202 944 SUPERFAMILY Protein kinase-like (PK-like) 653 927 IPR011009 -
Phco3g01202 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Phco3g01202 944 Pfam Protein tyrosine and serine/threonine kinase 674 928 IPR001245 GO:0004672|GO:0006468
Phco3g01202 944 ProSitePatterns Protein kinases ATP-binding region signature. 680 701 IPR017441 GO:0005524
Phco3g01202 944 FunFam Serine/threonine-protein kinase isoform 1 664 752 - -
Phco3g01202 944 ProSiteProfiles Protein kinase domain profile. 674 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01202 944 MobiDBLite consensus disorder prediction 109 142 - -
Phco3g01202 944 Gene3D Phosphorylase Kinase; domain 1 667 751 - -
Phco3g01202 944 CDD STKc_MAP3K-like 680 928 - -
Phco3g01202 944 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 197 933 - -
Phco3g01202 944 PRINTS Tyrosine kinase catalytic domain signature 748 761 IPR001245 GO:0004672|GO:0006468
Phco3g01202 944 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Phco3g01202 944 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Phco3g01202 944 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Phco3g01202 944 Pfam Ethylene-responsive protein kinase Le-CTR1 261 470 - -
Phco3g01202 944 SMART serkin_6 674 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01202 Phco-Chr3 10624942 10630046 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco3g01202 PK_Tyr_Ser-Thr 9.9e-66 CL0016