Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01171 ATGAACCTTTGTCCTGAAACTGAAAGTGTCTCAGCCCAGAAGAAGAGAGCAATAATGGAAGAGCTTGTTAAGGGTCAGGAAGCTGCTACTCAACTCAGAGTTCTGCTTCATAACCCCTTTGAGACTGAACCCTCTCTCTCTTCTCATCACCTCATAGCCAAGGTGCTCACATCTTTCACACACGCTCTTTCTGTTATCAACTCTTCTCTTCTGCTACCTGGTTCTGCAGATGGGCTTGCTTATCAGAATCTCCTGTTTTCCGGCAAAAATAGGTGGTCTGTGCCCCGTTCCAGCAACTGTCCAACAGCTGGAGATTGCAGTGAGAAGAGATTGCAAAAGGGTGGAAGAGGTCGCTACAGTAGAAGAAAGAGTGCATTCACATGGACTGAACTATCTTGCACTACTGATGACAATCTTGCATGGAGGAAGTATGGACAAAAGGAAATCGGAAATTCTCAATTCCCTAGGAATGATGAAAGATTGCATGAAAGATCAGATAATGAGATGCAGAATCAGGGGAATGAGAGTTTGAACGATAAATTTCGAGGCAAAGCAAAGATTAGTGATTCTATAAGTTCATTGCTCTCATTATCAGAAAGTTCTGACAAAGGCACTGATTTATCAAATTCACACGATTATTCCGGTCCCTCATGA 654 0.4297 MNLCPETESVSAQKKRAIMEELVKGQEAATQLRVLLHNPFETEPSLSSHHLIAKVLTSFTHALSVINSSLLLPGSADGLAYQNLLFSGKNRWSVPRSSNCPTAGDCSEKRLQKGGRGRYSRRKSAFTWTELSCTTDDNLAWRKYGQKEIGNSQFPRNDERLHERSDNEMQNQGNESLNDKFRGKAKISDSISSLLSLSESSDKGTDLSNSHDYSGPS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01171 217 ProSiteProfiles WRKY domain profile. 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g01171 217 MobiDBLite consensus disorder prediction 97 118 - -
Phco3g01171 217 MobiDBLite consensus disorder prediction 162 183 - -
Phco3g01171 217 Pfam WRKY DNA -binding domain 136 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g01171 217 MobiDBLite consensus disorder prediction 196 217 - -
Phco3g01171 217 Gene3D WRKY domain 120 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g01171 217 SUPERFAMILY WRKY DNA-binding domain 133 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g01171 217 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 157 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01171 Phco-Chr3 10112763 10114364 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco3g01171 WRKY 3.1e-05 CL0274