Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01166 ATGATAAACATCATTTGTACTGAAACTGATGCAAAGAAGAAGAGAGAGATAATGAAAGAAATTGTTAAGGGTAAAGAAGCTGCTTCCCAGCTAAAGATTCTGCTTCAGAAACCCTCTGAGAGTGAACCCTCTCCCTCTTATCACCAACTCATGGCCATTGTCCTCAAATCTTTCACACAATCTCTTTCTATCATTTCTTCAGAACCCAGTTCAGCAGATGTGGTGGCTCGCCTGAATTCCACCCAATATGGGTCGCCGGTGACCGGTTCCGGCATTGATCCAACGTCTGGACTTTGCAGTGAGAAGAGACCCCAAAAGGGTGGGAGAGGTCGCTACAATAGAAGCAAGGGTGTACTGAGAAAGACCATAGTCTCTTGCACCACTGATGATAACTATGCATGGAGGAAGTATGGGCAAAAGGAAATCCAGAATTCTAAATTTCCTAGGAGTTACTTCAGGTGCAGTTACAAGCATGATCAAGGTTGTAAAGCAACCAAACAGGTGCAACTGGATCATGATAATCCATATCTGTATCGAATTACGTACATTGGTATTCACACATGCAACGTCATTCCTATGGTTACACACACAACAACAGATTCTTCCACTTCGGAATCATATCATCTGCATTCTGATCGTGACTCCAATGTGCAAGATTATCTCCTTAGCTCACCACACTTAGCTATAAAACCAGAATTTCCCAAAGAAACTCACACACCAAGTGATCTTACTGATCACGATTTATTAGATCTTAGCATGTTCTTGGAATATTGGAAGGAATCTGAAGCATCCAACTCTACCATTATGCCCTTAAGGAAGGCACCTGATAACAACGCAGCTGGTGTGTATTCATGTACAGACTCTCAAAATCTGGACATGGATTTTGGTGGGGTGGCATCTCTTCTTCTTCACCCTCACTTTCACTTTCACGGAGATCAGTTCTTTTAG 948 0.4251 MINIICTETDAKKKREIMKEIVKGKEAASQLKILLQKPSESEPSPSYHQLMAIVLKSFTQSLSIISSEPSSADVVARLNSTQYGSPVTGSGIDPTSGLCSEKRPQKGGRGRYNRSKGVLRKTIVSCTTDDNYAWRKYGQKEIQNSKFPRSYFRCSYKHDQGCKATKQVQLDHDNPYLYRITYIGIHTCNVIPMVTHTTTDSSTSESYHLHSDRDSNVQDYLLSSPHLAIKPEFPKETHTPSDLTDHDLLDLSMFLEYWKESEASNSTIMPLRKAPDNNAAGVYSCTDSQNLDMDFGGVASLLLHPHFHFHGDQFF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01166 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 206 IPR044810 GO:0003700
Phco3g01166 315 ProSiteProfiles WRKY domain profile. 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g01166 315 SUPERFAMILY WRKY DNA-binding domain 125 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g01166 315 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g01166 315 Pfam WRKY DNA -binding domain 129 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g01166 315 Gene3D WRKY domain 113 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g01166 315 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01166 Phco-Chr3 10076538 10078970 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco3g01166 WRKY 4.4e-24 CL0274