Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01152 ATGGTTTCCTCTCAGTTCTCTGTCTTAAATGGAAATAGTTCACCAAAGTCTTTCCTGAACCAGTTGGTTCTACCAAATGGACCACCTGATCTTTTGCCTTCTTCGAATTGTGAGGATTTTGAATTTTCTGATGTGTTTGGTCCATCTCCTGTTGTAGCCTCAATAACAGTAAGCTCCGAGAAACATGGAGATTACGTAGCTACGCGAGGTTCAGGTGGAAAGATATACAATGATTTTGACTGCAATAACATCCGCTCTCAATCTTTATTGGCTCCCACAACTTGTATTGGTCAGTCCTTGCAGCTTAGCAAGCTCACCTTACATGAGACAGAAGATGCATTGGATCTTGTGGAGGTCTTAATAGAAACACAGAAAGAACTTAAGGAACATTCTATTAACAATGCAGAAGTAGAGAAAAATAATTTACATTTCAATGATTACTGTCTGAATAATCAGACTATTGGAGTTGAGGATTTTGAACTTTTGAAGGTTGTTGGGCAAGGTGCTTTTGGCAAGGTGTACCAGGTGAGGAGGGCAGGTACTTCTGAAATATATGCTATGAAGGTCATGCGCAAGGATAAGATCATGGAGAGAAACCATGCTGAATATGTAAAATCTGAAAGGGATATACTAACAAAGGTGGACAACCCATTTGTTGTGCGGCTCAGATACGCTTTCCAAACCAAATATAGGCTGTACCTTGTGCTTGATTTTGTCAATGGTGGCCACCTTTTCTTTCAGCTCTATCACCAAGGCTTATTCAGGGAAGATTTGGCACGCTTTTATGCCGCAGAGATTATCTGTGCTGTTTCTTATCTTCATGCAAATGATATAATGCACAGGGATCTTAAGCCTGAAAATATTCTTCTCGATGTAGATGGTCATGCTGTGTTAACAGATTTTGGTCTGGCTAAGCAATTCAATGAGACCGGAAGGTCTAATTCTATGTGTGGAACTGTAGAATACATGGCCCCTGAAATTGTAATGGGAAAAGGTCATGATAAGGCAGCTGATTGGTGGAGTTTGGGAATTTTACTGTATGAAATGCTTACAGGAAAGCCTCCTTTCTCCGGCGGAAATAGACATAAGATGCAGCAGAAGATAATTAAAGACAAAATCAAGCTCCCAGCATTTTTGTCAAATGAGGCACATTCACTGTTAAAAGGGCTGTTGCAGAAGGATGTCAGCAAACGCCTTGGCAGTGGATCAAGAAGCAGTGAGGAGATTAAAAGCCACAAGTGGTTTAAGTCTGTCAACTGGAAGAAACTGGAAGCCCGAGAAGTTAGGCCAAGCTTTGTCCCAGATGTTGCTGGGAAGCACTGTGTTGCTAACTTCGAGGAGCGGTGGACTAATATGCCTTTGCTGGATTCTCCAGCTTCTAGTCCAAAAAAGGATGACAGTACCTTCAAGAAGTTCTCGTATACTGGATATCAGCAACATGCTTTTGTATCAAATTCAATGTTTGTGAACCTTCTGAGTGCCGCCTTTCACTCTTTTATGAATCTGCTACAAGTAGTTGGACCTTGA 1527 0.4132 MVSSQFSVLNGNSSPKSFLNQLVLPNGPPDLLPSSNCEDFEFSDVFGPSPVVASITVSSEKHGDYVATRGSGGKIYNDFDCNNIRSQSLLAPTTCIGQSLQLSKLTLHETEDALDLVEVLIETQKELKEHSINNAEVEKNNLHFNDYCLNNQTIGVEDFELLKVVGQGAFGKVYQVRRAGTSEIYAMKVMRKDKIMERNHAEYVKSERDILTKVDNPFVVRLRYAFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEIICAVSYLHANDIMHRDLKPENILLDVDGHAVLTDFGLAKQFNETGRSNSMCGTVEYMAPEIVMGKGHDKAADWWSLGILLYEMLTGKPPFSGGNRHKMQQKIIKDKIKLPAFLSNEAHSLLKGLLQKDVSKRLGSGSRSSEEIKSHKWFKSVNWKKLEAREVRPSFVPDVAGKHCVANFEERWTNMPLLDSPASSPKKDDSTFKKFSYTGYQQHAFVSNSMFVNLLSAAFHSFMNLLQVVGP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01152 508 CDD STKc_AGC 165 415 IPR045270 GO:0004674|GO:0005524
Phco3g01152 508 Gene3D Transferase(Phosphotransferase) domain 1 239 434 - -
Phco3g01152 508 ProSitePatterns Protein kinases ATP-binding region signature. 165 188 IPR017441 GO:0005524
Phco3g01152 508 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco3g01152 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Phco3g01152 508 Coils Coil 120 140 - -
Phco3g01152 508 SUPERFAMILY Protein kinase-like (PK-like) 156 484 IPR011009 -
Phco3g01152 508 Gene3D Phosphorylase Kinase; domain 1 157 458 - -
Phco3g01152 508 Pfam Protein kinase domain 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01152 508 SMART serkin_6 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01152 508 SMART pkinase_C_6 416 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco3g01152 508 FunFam Non-specific serine/threonine protein kinase 239 434 - -
Phco3g01152 508 PANTHER RIBOSOMAL PROTEIN S6 KINASE 114 475 - -
Phco3g01152 508 FunFam Non-specific serine/threonine protein kinase 156 260 - -
Phco3g01152 508 ProSiteProfiles Protein kinase domain profile. 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01152 Phco-Chr3 9961907 9964972 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Phco3g01152 Pkinase 1.2e-74 CL0016