Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01150 ATGAAGTTCCAATTCCATGCTGTTTCATTTGTTCTGCTAAGCTTCATAATGTCTCTCTTTGGCCTGATAGTAGCTGACTTGAACTCCGACAGACAAGCTCTCCTTGAGTTCTTTTCAAATGTTCCACATGCCCCAAGGTTAAATTGGAGTGAGTCCACTCCAATTTGTACTTCTTGGGCTGGTGTGACTTGCAACCAAAATGAAACTAGTGTAATCAGCATCCGTCTTCCAGGGGCAGGTTTCAAGGGTTCCATTCCAGAGAACAGCCTAGGAAAACTCAATTCTCTTAAAATTCTGAGCCTTCACTCCAATGGCCTTAGAGGAAACCTTCCTTCTGACATCCTCTCTATTCCTTCACTCCAATATGTAAACCTGCAGCAAAATAACTTCTCAGGTCTAATCCCTTCTTCTATCTCCCCTAAACTCGTAGCATTAGATATTTCCTCTAACAATTTCTCGGGAAGTATCCCACCTACCCTTCAGAATCTCAGTAGACTCACCTGGTTGTATCTCCAAAACAACTCCCTCTCGGGGGCTATTCCTGACTTCAACTTTCCAAGTCTCAAGTATTTGAATTTGAGCTATAACAACTTGAATGGCTCAATTCCAAATTCCATCAACAATTATCCGTACACTTCTTTTGCCGGGAATTCTCACTTGTGTGGACCACCTCTCAATAAGTGTTCTGCAGCCTCAACTCCATCTTCTTCTTCTTCCTCCCTTTCTCCTTCTCCTGTTTATCAACCACTCTCTCCAGCAGCAGCTCCCCAAAATAGAAGTGCTACCACTTCAAAGAGTTACTTTGGCCTAGCTTCTATACTTGCTCTGGCAATTGGGGGCTGCGCCTTCTTGTCTCTCCTGGTTTTGGTGATGTTTGTATGCTGTTTAAAGAAGAACAAGAGTCAAAGCAGTGGCATACTTACAGGAAAGGCACCGTGTTCTGGAAAGACTGAGGTTTCAAAGAGTTTTGGGAGTGGGGTGCAAGACGTTGAAAAAAACAGGTTGTTTTTCTTTGAAGGTTGCTCTTACAGCTTTGACCTTGAAGATTTGTTAAAGGCTTCAGCTGAAGTTCTTGGAAAGGGGAGCTATGGAACAACATATAGGGCTGCTTTGGAGGATGGAACAGCTGTGGTAGTTAAAAGGTTGAGGGAAGTTCTAGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGAGGTTGTAGGAAGAATTGGTCGGCACCCCAATGTTATGCCCCTTCGAGCTTTTTACTTCTCCAAAGATGAGAAACTTCTAGTATATGACTACATGCCTGGAGGCAGCTTGTTTTCCTTGTTGCATGGAAACAGAGGCATGGGAAGAGCTCCATTAGACTGGGATTCAAGAATGAAGATAGCACTAGGAGCTGCAAAGGGAATTGCTTCCATTCACACTGACCACATGGATTCAAAACTTACTCATGGCAACATCAAGTCCTCCAATGTGCTCATAACCCAAGAACATGATGGCTGCATCACTGATGTAGGACTCACTCCTGTGATGACCACCCAATCAACCATGTCAAAAGCCAACGGCTACCGTGCTCCCGAAGTAACCGAGTACCGGAGGATCACTCAGAAGTCTGATGTTTACAGCTTTGGAGTGCTCCTTCTTGAAATGCTCACTGGCAAGGCTCCAATGGGATATTCTGGCTATGAGGACATGGTTGATCTTCCAAGATGGGTGAGGTCCGTGGTTCGAGAGGAATGGACTGCTGAAGTTTTTGATGAGGAACTACTTAGAGGGCAGTATTTTGAAGAGGAAATGGTACAGATGCTTCAGATTGCACTGGCATGTGTGGCAAAAGTGGCAGATAATAGGCCAACAATGGATGAAACTGTTAGGAACATAGAGGAAATTAGGCTTCCTGATTTGAATAACCGTAACACATCATCTGAGTCTGAATCTAATGTACAAACTCCATGA 1938 0.4412 MKFQFHAVSFVLLSFIMSLFGLIVADLNSDRQALLEFFSNVPHAPRLNWSESTPICTSWAGVTCNQNETSVISIRLPGAGFKGSIPENSLGKLNSLKILSLHSNGLRGNLPSDILSIPSLQYVNLQQNNFSGLIPSSISPKLVALDISSNNFSGSIPPTLQNLSRLTWLYLQNNSLSGAIPDFNFPSLKYLNLSYNNLNGSIPNSINNYPYTSFAGNSHLCGPPLNKCSAASTPSSSSSSLSPSPVYQPLSPAAAPQNRSATTSKSYFGLASILALAIGGCAFLSLLVLVMFVCCLKKNKSQSSGILTGKAPCSGKTEVSKSFGSGVQDVEKNRLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYRAALEDGTAVVVKRLREVLVGKKEFEQQMEVVGRIGRHPNVMPLRAFYFSKDEKLLVYDYMPGGSLFSLLHGNRGMGRAPLDWDSRMKIALGAAKGIASIHTDHMDSKLTHGNIKSSNVLITQEHDGCITDVGLTPVMTTQSTMSKANGYRAPEVTEYRRITQKSDVYSFGVLLLEMLTGKAPMGYSGYEDMVDLPRWVRSVVREEWTAEVFDEELLRGQYFEEEMVQMLQIALACVAKVADNRPTMDETVRNIEEIRLPDLNNRNTSSESESNVQTP 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01150 645 FunFam Leucine-rich repeat receptor-like protein kinase 142 228 - -
Phco3g01150 645 MobiDBLite consensus disorder prediction 627 645 - -
Phco3g01150 645 SUPERFAMILY Protein kinase-like (PK-like) 356 620 IPR011009 -
Phco3g01150 645 Gene3D Ribonuclease Inhibitor 142 230 IPR032675 -
Phco3g01150 645 SUPERFAMILY L domain-like 40 225 - -
Phco3g01150 645 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Phco3g01150 645 Pfam Protein kinase domain 356 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01150 645 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Phco3g01150 645 FunFam pollen receptor-like kinase 1 320 427 - -
Phco3g01150 645 PANTHER OS05G0588300 PROTEIN 11 637 - -
Phco3g01150 645 ProSitePatterns Protein kinases ATP-binding region signature. 358 389 IPR017441 GO:0005524
Phco3g01150 645 Gene3D Phosphorylase Kinase; domain 1 318 427 - -
Phco3g01150 645 FunFam Leucine-rich repeat receptor-like kinase 30 141 - -
Phco3g01150 645 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Phco3g01150 645 ProSiteProfiles Protein kinase domain profile. 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01150 645 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Phco3g01150 645 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 428 635 - -
Phco3g01150 645 Gene3D Transferase(Phosphotransferase) domain 1 428 643 - -
Phco3g01150 645 MobiDBLite consensus disorder prediction 625 645 - -
Phco3g01150 645 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01150 Phco-Chr3 9953297 9955721 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco3g01150 Pkinase 7.4e-32 CL0016