Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01146 ATGGCTAAAATCTCGATTGAAGTGTGCTTGATATCAGCTCGTGGTGTGAGGGGTTCACCCTCACTTTGGAAGCGTCAGTGGTATGCAGTTGGGTGGGTTGATCCTAAGAGCAAGTACTGTACCAAAGTTGATGCTTCTGGGAATGCCAACCCTCTTTGGAGGACCAAGTTTGCCATCCAGGTTGATAGCTCCGACCCAGATCTTGCACTCCACTTGGAGGTTTATAGCAGAGATCCTTTATTCCTCACAGAGAAGTTGCATGGCTCCGCAACCGTTGTTCTCAGAGAGTTTCTGACCAAGCAGGTCAACAGCTCTGAGGAAGTAGGAAGCTACCAGTTGAGAAAGAAGAAATCCAACAAACCAAGTGGCTTCATTGATGTATCGATCCGCCTTTCTGAGAACAAGGAGGACCCTAGTTTCCACCCGCAAGGTGATGGGGAAGGAATAGTGCTCCTAGATTATGGCAATAATACTCACTTGACCCCAGGGGTTGGATTTGGGCAAGCCTACCCACAGCAAAAGCCTCAAGCTTCATTCCATCATTTCCATGGGTCAGGAAAACAGGTCCAAACTAATGTTCCCTACTCACATCCAGTGCCATTTCCTGCAGATTATGCTACTAATCCTCCTTATATGAGTGGACCAAGCTACCCTGCAGCCACTGGACCAAGTTATCAAACACCCAGAACAACTCCTCCACCACCACACTCAAATGTCAATTATGCTCCCACTTTTTTCCCAACTAATGGTGGCATGGCACCAAGTTATTTTAACATGCCATCATCATCATCCGGGGCAGGTCCTAGGCCAAGAGGGCCTCCAGGATTTGCAATTGGGGCAGGTGCAGGAGCATTGGCAGCTGGGGCTGTAATGTTTGGTGATAACTTTATGTCACAATTAGGTGATCCCACTCTTAGCATTGCAACTGATCCTCTTTTCTGA 942 0.4777 MAKISIEVCLISARGVRGSPSLWKRQWYAVGWVDPKSKYCTKVDASGNANPLWRTKFAIQVDSSDPDLALHLEVYSRDPLFLTEKLHGSATVVLREFLTKQVNSSEEVGSYQLRKKKSNKPSGFIDVSIRLSENKEDPSFHPQGDGEGIVLLDYGNNTHLTPGVGFGQAYPQQKPQASFHHFHGSGKQVQTNVPYSHPVPFPADYATNPPYMSGPSYPAATGPSYQTPRTTPPPPHSNVNYAPTFFPTNGGMAPSYFNMPSSSSGAGPRPRGPPGFAIGAGAGALAAGAVMFGDNFMSQLGDPTLSIATDPLF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01146 313 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Phco3g01146 313 Gene3D C2 domain 3 145 IPR035892 -
Phco3g01146 313 PANTHER INGRESSION PROTEIN FIC1 6 258 - -
Phco3g01146 313 SMART C2_3c 5 106 IPR000008 -
Phco3g01146 313 Pfam C2 domain 7 102 IPR000008 -
Phco3g01146 313 MobiDBLite consensus disorder prediction 171 189 - -
Phco3g01146 313 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 131 IPR035892 -
Phco3g01146 313 CDD C2_SRC2_like 5 127 IPR044750 GO:0006952
Phco3g01146 313 MobiDBLite consensus disorder prediction 166 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01146 Phco-Chr3 9912460 9913888 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01146 3 9912460 9913888 Phco7g01560 7 14842629 14846348 PCT