Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01112 ATGGAAACGAAGAAGCTTCAGCTTCGCTTCTCGCTCGGCCGACAATCCTCCCTCGCGCCGGAGCGCGACGGTGCGGAGGACGTGGCGGAGGCGCTGGATCCGACGGTTCGGTTGATGTATCTGGCCAACGAAGGAGACTTGGTCGGGATTGAGGAACTGTTGGACGCGGGGAGCGACGTCAGTTTCACCGACATTGATGGCCGCACTGCGCTCCACGTCGCCGCCTGCCAGGGCCGCACCGACGTTGTTGACCTGCTAGTACGACGAGGGGCTGACCCTCTAGCTGATGCAATGTACTACAAAAACCACGACATCGTGAAGCTCTTGGAGAAACACGGTGCAAAACCTCCTATAACTCCCATGCATGTGGAGAATGCTCGAGAAGTCCCAGAGTATGAGATTGATCCTTCTGAGCTTGATTTTACTAATAGTTTCTGCATAACAAAGGTTGTAGTCAAGACACTTGGAGAGGAAGTGTTCACCGATGATGATAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTTCAGTTTTTGGGTGCTGTAACCCATAGTACCCCCAATGATGATCGTCACAGAATATCTACCCCAGACAACAGAAATATTTTGCGGGATGATTCTGGGCATCTGAAAGTTGCTGACTTTGGAGTTAGCAAGTTGCTTAAATTTACTAAAACAGTCAAAGAAGACAAACCTGTGACAAGACAAGCCTCGATACATCATGTAGGGCGATATGTTGCACCAGAAGTCTATAGAAATGAGGAATACGACACAAAAGTGGATGTGTTTTCTTTTGCTCTGATATTACAGGAGATGATTGAAGGTTGTCCACCGTTCTATGCAAAGCCAGAAAACAAAGTTCCCAAAGCGTATGTTGAAAATGAGCAGCCACCATTTACAGCATTGCCAAAGCTTTATGCTCATGGACTAAAACAGTTAATTGAGGAATGCTGGGATGAAAAACCACACAAAAGACCAACATTTAGGCAAATAATTGGGAGTTTGGAAGAAATCAACAACCATCTTATTCAAAAGAGGCGCTGGAAGATTGGAGCTCCTGGATGCATCCAGTACCTGGAGGCCCTATTTATGGGTAATCGCACAAGTCCAAAGCCTGATCCTTCCTCCATCTATTTTGAAATTGTGGACGAAGATTTTTGCTGGAGTTTGCAGTATAACTCGGTTGCAATATTTTGCTTAAAAGTTTCTTCCTCAGTAATGATGCTGCCTCAAATGATACTGAACGATGTTGACGGATCCAAGCAACCAATGCCATATGTACGACTCTGTTATGTGTTTAGTTGA 1332 0.4542 METKKLQLRFSLGRQSSLAPERDGAEDVAEALDPTVRLMYLANEGDLVGIEELLDAGSDVSFTDIDGRTALHVAACQGRTDVVDLLVRRGADPLADAMYYKNHDIVKLLEKHGAKPPITPMHVENAREVPEYEIDPSELDFTNSFCITKVVVKTLGEEVFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTHSTPNDDRHRISTPDNRNILRDDSGHLKVADFGVSKLLKFTKTVKEDKPVTRQASIHHVGRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYAKPENKVPKAYVENEQPPFTALPKLYAHGLKQLIEECWDEKPHKRPTFRQIIGSLEEINNHLIQKRRWKIGAPGCIQYLEALFMGNRTSPKPDPSSIYFEIVDEDFCWSLQYNSVAIFCLKVSSSVMMLPQMILNDVDGSKQPMPYVRLCYVFS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01112 443 Gene3D Phosphorylase Kinase; domain 1 140 196 - -
Phco3g01112 443 ProSiteProfiles Ankyrin repeat region circular profile. 66 92 - -
Phco3g01112 443 FunFam serine/threonine-protein kinase STY46-like 134 197 - -
Phco3g01112 443 Gene3D Transferase(Phosphotransferase) domain 1 197 360 - -
Phco3g01112 443 Pfam Ankyrin repeats (3 copies) 38 116 IPR002110 GO:0005515
Phco3g01112 443 SUPERFAMILY Ankyrin repeat 37 119 IPR036770 -
Phco3g01112 443 Pfam Protein tyrosine and serine/threonine kinase 148 196 IPR001245 GO:0004672|GO:0006468
Phco3g01112 443 Pfam Protein tyrosine and serine/threonine kinase 209 343 IPR001245 GO:0004672|GO:0006468
Phco3g01112 443 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 148 194 - -
Phco3g01112 443 SUPERFAMILY Protein kinase-like (PK-like) 149 346 IPR011009 -
Phco3g01112 443 ProSiteProfiles Ankyrin repeat profile. 66 92 IPR002110 GO:0005515
Phco3g01112 443 SMART ANK_2a 32 62 IPR002110 GO:0005515
Phco3g01112 443 SMART ANK_2a 66 95 IPR002110 GO:0005515
Phco3g01112 443 ProSiteProfiles Protein kinase domain profile. 1 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01112 443 Gene3D - 29 133 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01112 Phco-Chr3 9538957 9545895 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Phco3g01112 PK_Tyr_Ser-Thr 1.6e-20 CL0016