Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01091 ATGTCATCCAACAGTTCTTTGAAAGGGGAATTGACAAAGAAAACACCATTTTTGGGGTTGAGACGATGGGTTTTGATTGGGGTAGGTGTTGGTGCATTTATAGTGCTTATTCTTTGTATATTATCGATATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTTTGGACAAGTATTCTATATCCCAAATACCAAATATCTCCAAAGATATCGACGTTGACAAGGTTGGGGTGCTGAGTTCTCATGTCCAACCAGAAAATGTGCTTACGCCTGTTCATAACAAGATAAGTGATAAGAATTCAGATAATGTATCAGTTCATTTGGGTAATAGCAAATCTGGAGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCCGCAGAAGAAGGAAGCTCTGGGAATGTTAAGAAACAATCTACATTGTCACATGGAGGGTTGGCCACTGCCTCTCCATTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAAACGATTCTCAAAGGAGAATATTATTGGTGAGGGTGGATATGGGATTGTTTACAAGGGAAGACTGATTAATGGAATTGAGGTGGCAGTGAAGAAGCTTCTTAATAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGACATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAGGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGACACATGCACCAGCAAGGGACACTTACTTGGGAGGCCCGCTTGAAAGTTATACTTGGCACAGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAAGTTATTCATCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAATTCAATGCAAAGGTTTCTGATTTTGGCTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATAACGACAAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGTCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTAGGGACAAGGAGGGCTGAAGAAGTAGTGGACTCAAACCTCCAAGTTAAACCACCACTGCGTGCTTTGAAGCGCACTCTTTTGGTTGCACTTAGGTGTATTGATCCTGATGCTGACAAGAGGCCCAAAATGAGTCAAGTTGTGAGGATGCTTGAAGCTGATGAATATCCATACCGAGAGGATAGAAGAAACAGAAAGAGTGGCACTGTGAGCATGGAAATTGAAACTGTGAAGGATATTTCTGGTTCATCTGATGCTGAAAAGATGGGTCATGCTGAAACAACTCAAGGATAG 1518 0.415 MSSNSSLKGELTKKTPFLGLRRWVLIGVGVGAFIVLILCILSIWVMFRRKSRRSLDKYSISQIPNISKDIDVDKVGVLSSHVQPENVLTPVHNKISDKNSDNVSVHLGNSKSGDPDNISQCSSIYHHERGFSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATKRFSKENIIGEGGYGIVYKGRLINGIEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGHMHQQGTLTWEARLKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRAEEVVDSNLQVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPYREDRRNRKSGTVSMEIETVKDISGSSDAEKMGHAETTQG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01091 505 CDD STKc_IRAK 194 460 - -
Phco3g01091 505 FunFam Putative receptor-like serine/threonine-protein kinase 264 474 - -
Phco3g01091 505 MobiDBLite consensus disorder prediction 467 505 - -
Phco3g01091 505 Coils Coil 208 228 - -
Phco3g01091 505 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Phco3g01091 505 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01091 505 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Phco3g01091 505 Gene3D Transferase(Phosphotransferase) domain 1 264 477 - -
Phco3g01091 505 FunFam Putative receptor-like protein kinase 170 263 - -
Phco3g01091 505 PANTHER OS01G0323000 PROTEIN 1 479 - -
Phco3g01091 505 MobiDBLite consensus disorder prediction 92 119 - -
Phco3g01091 505 Pfam Protein tyrosine and serine/threonine kinase 191 459 IPR001245 GO:0004672|GO:0006468
Phco3g01091 505 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g01091 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Phco3g01091 505 SUPERFAMILY Protein kinase-like (PK-like) 172 462 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01091 Phco-Chr3 9366896 9370018 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco3g01091 PK_Tyr_Ser-Thr 5.9e-48 CL0016