Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01070 ATGGATGTGGCCAAGTTACACAACACTGATGATGAGGACAAGAAAGAAGATGAAGTTGTGCTTCCAGGGTTTAGATTCCATCCAACAGATGAAGAGCTTGTGGGGTTTTATCTCAGGCGAAAGGTGGAGAAGAAGCCTCTCAGAATTGAACTCATCAAACAGATTGACATATACAAATATGATCCATGGGATCTTCCAAAAGCAAGTTCTGTGGGGGAGAAGGAATGGTACTTCTTCTGCATAAGAGGGAGAAAGTACAGGAACAGCATAAGGCCTAATAGAGTAACAGGGTCTGGATTTTGGAAAGCCACAGGGATTGATAAGCCTATATACTGTGTTAAAGAACCCCATGAATGCATTGGTCTGAAGAAATCATTGGTTTATTACCGTGGAAGTGCTGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCTCCCAATGGAAAATCTACCAATACTCCACAACCTAATCACATTCAAGAAGCTGAAGTGTGGACGCTGTGTCGAATATTGAAACGAGTCCCATCTTACAAGAAGTACACACCAAATTTGAAAGACTCAGCCACAAAGTCTTCAAGTTCCAAAACATGCAGTTTAGAATCTGACAACAGCAAGCCATACTTGACTTTCACAGACTCACCATCATCACTGCTCCTTCAACAGAATGAAATGAAGAAACCAGTTTTTGGACATGGTCATCTACCTCACCCTCCAACATCCTTCTCTTACTCAACTTTTTGGAATCATCAGAATCTGGAATTTGCTCATGAGAATTGGGATGATCTCACATCTGTGGTTCAGTTTGCTGTTGATCCATCTAGGGTTTCTCATCATTGTAAAGACTAA 858 0.4138 MDVAKLHNTDDEDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPKASSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKSTNTPQPNHIQEAEVWTLCRILKRVPSYKKYTPNLKDSATKSSSSKTCSLESDNSKPYLTFTDSPSSLLLQQNEMKKPVFGHGHLPHPPTSFSYSTFWNHQNLEFAHENWDDLTSVVQFAVDPSRVSHHCKD 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01070 285 MobiDBLite consensus disorder prediction 186 206 - -
Phco3g01070 285 SUPERFAMILY NAC domain 19 176 IPR036093 GO:0003677|GO:0006355
Phco3g01070 285 Gene3D NAC domain 29 180 IPR036093 GO:0003677|GO:0006355
Phco3g01070 285 ProSiteProfiles NAC domain profile. 20 177 IPR003441 GO:0003677|GO:0006355
Phco3g01070 285 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 227 - -
Phco3g01070 285 FunFam NAC domain-containing protein 35 29 180 - -
Phco3g01070 285 Pfam No apical meristem (NAM) protein 22 148 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco3g01070 Phco-Chr3 9200435 9203228 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco3g01070 NAM 3.8e-36 No_clan