Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01050 ATGAAAAATTGTGAGAGAAGTGTGAGGCAGTACAACAAATCTGAACTTCCACGCCTTCGTTGGACACCTGAACTCCATCAACACTTTGTTCAAGCTATTGAAAGTATAGGTGGAAAACACAAGGCAACTCCAAAGAGAATTCTGCAGCAGATGCGTGTGAGAGGACTGAGGATCGCTCACATCAAAAGCCATCTTCAGATGTACAGAAACTTGAAAGACTATGCCAAGAATTCTCCAGATCAGTTGGTGGAAGAAAATAGAAACGATTTCAAAGTATGCTCCATTTCTCCAACCCAAAGGATAATTCTGAAGGGGGAACTTCATCTCTTAGACAACAAAAAAGGGCTTTTACAAAGCAGTGAAGAAACTGATTATGATCTAAACCAGGAAGCCCAGTCAAGTGCATGGTTGGTGAGAGATGATGAGTCAAATGAAGAAGAAACTGTTCCTAATCTATTATTCTCCTTCAGCACACCTCTAATTTCCATGATGCAAATTGATGAGAATAGCAAAGACATGATGCAATTTTCCTCATCAACTGCAGCTGCTGCTAATCATTCTATTACCTTTGGAAACAGTTATATTAACTTAGACCTAACAATCTGA 606 0.3944 MKNCERSVRQYNKSELPRLRWTPELHQHFVQAIESIGGKHKATPKRILQQMRVRGLRIAHIKSHLQMYRNLKDYAKNSPDQLVEENRNDFKVCSISPTQRIILKGELHLLDNKKGLLQSSEETDYDLNQEAQSSAWLVRDDESNEEETVPNLLFSFSTPLISMMQIDENSKDMMQFSSSTAAAANHSITFGNSYINLDLTI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01050 201 SUPERFAMILY Homeodomain-like 17 70 IPR009057 -
Phco3g01050 201 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 136 IPR046955 GO:0003700
Phco3g01050 201 FunFam Two-component response regulator 12 74 - -
Phco3g01050 201 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 70 IPR006447 GO:0003677
Phco3g01050 201 Gene3D - 16 73 - -
Phco3g01050 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 73 IPR017930 -
Phco3g01050 201 Pfam Myb-like DNA-binding domain 19 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01050 Phco-Chr3 8972581 8976645 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco3g01050 Myb_DNA-binding 2.4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02218 11 19991122 19995745 Phco3g01050 3 8972581 8976645 PCT