Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00948 ATGGCTATTGCAGCTCCAGGGCAATTGAACGTGAATGAATCGCCCACTTGTGGATCTAGAAGTGTTGATTGCTTCGAGAAATTGGAGCAAATTGGCGAAGGCACATATGGTCAGGTTTACATGGCTAAAGAGATCAGAACTGGTGAAATTGTTGCTCTGAAGAAAATACGTATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTTAAGAAACTACATCATGAAAATGTGATCAAGCTGAAAGAAATTGTGACTTCTCCAGGTCCTGAGAAAGATGAACAGGGGAGGCCAGATGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCACGATTTAACAGGTCTTGCTGACCGACCTGGGATGAGATTTACAGTTCCCCAAATTAAGTGTTACATGAGACAACTTTTGACGGGGCTTCACTATTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGCTCAAATCTTCTTATAGACAATGAGGGAAATCTTAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAATGACCAAAATGCTAATCTTACAAATCGTGTCATTACATTATGGTACAGACCACCTGAGCTGCTGCTCGGGACAACAAAGTATGGGCCTGCTGTAGATATGTGGTCAGTTGGGTGCATTTTTGCTGAGCTTCTTCAGGGAAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAATAAAATATATGAGCTGTGTGGAGCACCAACTGAAATCAACTGGCCTGGGGTTTCTAAGATACCTTATTATAATAAATTTATGCCAACAAGGCCAATGAAAAGACGTTTGAGGGAAGTTTTCCGGCATTTTGATCATCATGCTCTGGAGTTGTTGGAGAAGATGTTGACACTTGATCCATCACAGAGAATTACTGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTACCATGTGACCCCAAGAGTTTACCCAAGTACGAGTCATCGCATGAGTTTCAGACAAAGAAAAAGCGCCAACAACAACGGCAAAATGAAGAAATGGCCAAGCGTCAGAAAATGCAGCACCCTCAGCAGCACACTCGTCTTCCCCCCATTCAGCAGCCTGGACAACATTCCCAAATGCGGTCAGGATCAAACCAACAAATTCATGGCTCTCAACCCCCAGTTGCTGCAGGACCTACTCATCATTATGGGAAGCCTCGAGGTCCATCTGGTGGACCGGGAAGATATCCTCCCAATGGGAACCAAGGTGGAGGATACAATCACCCAAATCGAGGAGGTCAAGGTGGTGGTGGTTATGGTACTGGACCTTATCCTCCTCAAGGGCGGGGAGCACCTTATGGGTCCAATAGCATGCCTGGTGGTGGTCCTCGTGGTGGGGGTGGTGGCAGCGGCTATGGAGTTGGAGCTCCGAATTATCCCCAGCAAGGTGGTCCATATGGGGGTTCAGCAGCTGGTCGTGGATCAAACATGATGGGTGGAAACCGCAATCAACAACAGTATGGTTGGCAGCAGTAA 1557 0.4509 MAIAAPGQLNVNESPTCGSRSVDCFEKLEQIGEGTYGQVYMAKEIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDQNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLQGKPIFPGKDEPEQLNKIYELCGAPTEINWPGVSKIPYYNKFMPTRPMKRRLREVFRHFDHHALELLEKMLTLDPSQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRLPPIQQPGQHSQMRSGSNQQIHGSQPPVAAGPTHHYGKPRGPSGGPGRYPPNGNQGGGYNHPNRGGQGGGGYGTGPYPPQGRGAPYGSNSMPGGGPRGGGGGSGYGVGAPNYPQQGGPYGGSAAGRGSNMMGGNRNQQQYGWQQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00948 518 CDD STKc_CDK9_like 25 324 - -
Phco3g00948 518 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Phco3g00948 518 PANTHER CELL DIVISION PROTEIN KINASE 23 330 - -
Phco3g00948 518 FunFam Cyclin-dependent kinase C-2 12 121 - -
Phco3g00948 518 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Phco3g00948 518 MobiDBLite consensus disorder prediction 503 518 - -
Phco3g00948 518 FunFam Cyclin-dependent kinase C-2 122 364 - -
Phco3g00948 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Phco3g00948 518 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Phco3g00948 518 MobiDBLite consensus disorder prediction 370 400 - -
Phco3g00948 518 MobiDBLite consensus disorder prediction 335 518 - -
Phco3g00948 518 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00948 518 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00948 518 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Phco3g00948 518 MobiDBLite consensus disorder prediction 337 366 - -
Phco3g00948 518 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00948 Phco-Chr3 7985718 7990399 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco3g00948 Pkinase 3.5e-75 CL0016