Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00926 ATGATGATGTTCGAGGACATTGGATTTTGTGGCGATTTGGATTTGTTAAGTTGCCCCCTTGGAGAGGAGGATGTTGCTGTGAGACAAATAGAACCAGATCCTGTTGTTGAGGATGATTATAGTGATGAAGAAATTGATATGGATGAGCTGGAGAAGCGAATGTGGAGGGACAAAGTGCGCCACAAACGATTGAAAGAACAAATCAAGGCCAAGGAAGGGACAGATGCAGTGAGGCAAAGGCAATCCCAAGAGCAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGAATACTGAAGTACATGCTGAAAATGATGGAGGTCTGCAAAGCACAAGGGTTTGTTTATGGGATCATTCCTGAGAAAGGGAAGCCAGTGACTGGAGCATCCGACAATCTTCGTGAATGGTGGAAGGACAAGGTCAGGTTTGATCGAAATGGTCCTGCTGCTATAGCAAAGTATCAGACTGATAATGCAATTGAAGGAAAGAATGATGGTTGCAAATCCATTGGTCCAACTCCACACACATTGCAGGAGTTGCAGGACACAACACTGGGTTCTCTTCTGTCAGCACTTATGCAGCACTGTGATCCCCCTCAGAGGAGGTTCCCATTAGAGAAGGGTGTTCCTCCGCCATGGTGGCCCACTGGGAATGAAGAATGGTGGCCTCAAATCGGTCTTCCCAAAGATCAAGGTCCTCCGCCTTACAAGAAACCTCATGACCTCAAGAAGGCATGGAAGGTTGGTGTTCTTACTGCTGTCATCAAGCACATGTCTCCTGATATTGCCAAGATTCGGAAGCTTGTAAGACAGTCTAAATGCCTTCAGGACAAAATGACAGCGAAGGAGAGTGCAACATGGCTTGCCATCGTCAACCAAGAGGAAGCCTTGGCTCGAGAGCTGTATCCTGACTATTGCCCCCCATTTTCCTCTGGTGGAGGTAATGGGTCCGTGGTCATCAATGATTGCAGTGAGTATGATGTTGATGGGGCAGAGGAGGAACCAAACTTTGATGTGGAGGACCGGAAGCCTGACCATCTCCATCCATCTAATCTTGGGATGGAGAGAATCACTGGAAGACTACCGCTACAACAAGTTTCTCTTCCATTTAAGGGAGATGTTGTCACAAACCTTGATTTCATCCGGAAGAGGAAGATTCCCGGTGACTTCAACCTCATGATGGATCCGAAAATCTACACTTGCGAGCATCCTCAATGCCCTTACAATGAACCTCGCCTTGGTTTCACTGACAGGTCGGCTAGGGACAATCATCAATTGAATTGTGCATGTAGAAACAGAGCTGCAGATTATGGTGGTGGTCCCAACTTCCATGATGCTGAGGTTAAGCCAGTCATATTCCCCCAGTCTTTTGTTCAACCCAGCACTACATCTCAGGCTGCAAGTGTGGTTCAACCTTCATTTAGTGTATCTGGGCTCGGAGTTCCGGAGGATGGCCAAAAAATGATAAATGACCTTATGACAATCTATGATGCAAATGTTGTAGGAAACAATAACTTAAGTTCCAACAACTTTGTACCTGCAGAAAATCATAACTTTTCTCAGACCATCTTACAGCAACACCAACAGGACAGCCGTGACAGTTTTTTCGCTGACCAAGGAATGGTGACGGAAGGAAACTTCTTTGCGCGAGAGGAAGGACAATTTGACAGATTCAAAAGCATGAACGTGAACGTGAACATGAACATGAACATTAACGCCCCTTTTGATGCCAACCACATGATGTTTAGCCCCCAGTGTGATTTGTCATCTTTTGATTTGAAGGATATACAAGGTGTAGGAATGGATACTGTTCACAAACAGCAAGAGGTTTCCATTTGGTTCCAGTGA 1848 0.4578 MMMFEDIGFCGDLDLLSCPLGEEDVAVRQIEPDPVVEDDYSDEEIDMDELEKRMWRDKVRHKRLKEQIKAKEGTDAVRQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQTDNAIEGKNDGCKSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARELYPDYCPPFSSGGGNGSVVINDCSEYDVDGAEEEPNFDVEDRKPDHLHPSNLGMERITGRLPLQQVSLPFKGDVVTNLDFIRKRKIPGDFNLMMDPKIYTCEHPQCPYNEPRLGFTDRSARDNHQLNCACRNRAADYGGGPNFHDAEVKPVIFPQSFVQPSTTSQAASVVQPSFSVSGLGVPEDGQKMINDLMTIYDANVVGNNNLSSNNFVPAENHNFSQTILQQHQQDSRDSFFADQGMVTEGNFFAREEGQFDRFKSMNVNVNMNMNINAPFDANHMMFSPQCDLSSFDLKDIQGVGMDTVHKQQEVSIWFQ 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00926 615 MobiDBLite consensus disorder prediction 333 353 - -
Phco3g00926 615 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Phco3g00926 615 FunFam Ethylene insensitive 3-like 1 168 305 - -
Phco3g00926 615 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Phco3g00926 615 Coils Coil 47 67 - -
Phco3g00926 615 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Phco3g00926 615 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 29 567 IPR006957 GO:0003700|GO:0005634
Phco3g00926 615 MobiDBLite consensus disorder prediction 70 91 - -
Phco3g00926 615 MobiDBLite consensus disorder prediction 336 350 - -
Phco3g00926 615 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Phco3g00926 615 FunFam Ethylene insensitive 3-like 1 80 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00926 Phco-Chr3 7749650 7751497 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Phco3g00926 EIN3 5.4e-129 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02360 11 26453396 26455270 Phco3g00926 3 7749650 7751497 PCT