Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00923 ATGGTTGGAGTAGGAACTACAAGGAAAGGCATGCAGGCTATCTGGTTGATGCTATTGTTGTTGGTGTCTATTGCATTGGGGAATTCAGATATTGATGCTCTCCTTGAATTTAAGAAGAGTATTCAGAATGACCCATCTGGATTTGTTTTTAATTCTTGGAATTCCAAGTCTTTAGATTCGGATGGATGTCCTAGGAACTGGTATGGAATATGGTGTAGTGAAGGCAGTGTTATATCAATCACTCTGGATAATGCTGGTTTGGTTGGTGAGTTTAATTTCCCGGCAATTAGTGGCCTTGCAATGCTTCGCAATTTGTCAGCTGTGAACAACCAGTTCACAGGAGAGCTCACACATGCTGCTTCAATGGAATCACTTGAATATCTTGATTTGTCCCTCAACAAGTTTAATGGACCGTTACTCTCTAACTTCGTTCAGTTGCGCAAGTTAGTATATCTGAATCTTTCTTCTAATGAACTTGGAGGCACCCTTACTATTGAGTTTCACAAACTTGAGCAGTTGAAGTATTTAGATATGCACATGAATAACTTTTCTGGGGATATTATGCATATCTTTTATCAGATGGGCAGTGTGCTATATGTTGACTTAAGCAGCAACAGGTTCTCCGGTGCACTGGATTTGGGACTTGTAGATGAATCTTTTCTCTCCTCAATTCAATATTTAAATGTTAGCCACAATTCCTTGAGAGGTGAGTTATTTGCTCATGATGGTATGCCATACCTTGACAGTTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGAGGGTAATATACCTTCCTTTACTTTTGTGGTATCTCTTCGGATTCTTCGACTTGCCTTCAACCAGCTGACTGGTTTGCTGCCAGAAGCCCTATTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCGAAACAAGCTTGAAGGTCCTATTGGAATTATTACCTCGGTGACTCTGAGGAAGCTTAATTTATCTTCAAACAAGTTGTATGGCCCCTTACCTCTCAGGGTAGGCCATTGTGCTGTCATAGATTTGAGTAATAACACACTGTCAGGTAATTTCTCAAGGATTGGATATTGGGGTAACTATGTGGAAGTTGTTCAGCTAAGTACCAACACATTGATAGGAATGCTTCCAAACGAAACTTCTCAATTTTTAAGGTTAACTGAACTTAAGGTATCCAATAACTTATTGGAGGGCTTTCTCCCACCAATTTTGGGAACATATCCAGAACTAAAGGACATCGATCTTAGCCTCAACCAGCTTTCTGGGTTCCTCCTGCCAAGCTTTTTTTACTCAACCAAATTGATTAATCTTAATCTCTCCAACAATAAGTTTTCTGGATTAATTCCTATTCAAGTTCAACCTCCAAATACTCCACTAGTTTCTACTGAAAATATTAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGACTCTTCCTTCAAATATGAGCAGCCTTCACAATTTGTCATATCTCAATTTATGCAACAACAAATTGGAAGGTACTATTCCTGATGACCTTCCAGAAGAGTTGAGAGTATTAAATGTGTCCTTCAATAATTTTTCCGGTGTTGTACCTGAAAACATAAAGCATTTTCCTGAATCGGCATTTCATCCAGGAAATCCTATGCTGGTGTTTCCTCATTCGCAATCATCACCAAAAGATACTTCCAACCTAGGTTTGAGGGAACATCAGTTACATAAAAGGTCTGCCACTAGGATTGCCCTGATTGCATGTTTGGTTGCTGGTGCTTTTGTGATGGCTTTTGTGGGAATAATAATTTATTATAAGGTTCATCATGAAAAAGAAATGACTTCTAAACAAAATGAAGCAAGAGGCATCACTCAAGAGAGTACTTTCACATCAAATATAGAGGCAGCTTACAGAAATTTGGAAGCATTACCACCTTCTCAAAGGGGCTCTTCTGATGCTGCAAGCAATATTCATCCAGTGGGAGAGAAGTCTATGAATCTTGGCAGTAGTGAGTCAGGTAAGAACGAGGAAGGAATGTATTCCCCAATGTCTATTTTATCACCTTCAAATCCTTCATCTTCTAAAAGCCATCAGTTTGAGAATCCTGGTTCCCTCCAAGTATCCTCTCCAGATAAACTGGTTGGAGACTTGCATATATTTGATGGGTCCTTGGTACTAACTGCGGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCACGGAACACTTTACAAAGCGACACTTGACTCTGGTCATGCATTGGCTATCAAATGGTTAAGAGAAGGAATAACCAAAGGAAAAAAGGAGTTGGCAAGGGAAATAAAGAAACTAGGGACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTATCTGGGGCCAAAGGAACATGAAAAACTGATCATATCAAATTACATGAATGCACAATCTTTGGACATTTATCTCCATGAAGTAGATAAAACAAATCTCCATCCTTTGACTCTTGATGAGAGGCTGAGGGTGGCTATAGAGGTGGCGCTATGTCTACATTTCTTACACGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACGAACATTTTGCTAGAAACTCCCAACAGAGATGTCCTCCTCACAGACTACAGCCTGCACAGGATACTCACTGCTGCAGGTACTACCGAGCAAGTTCTGAATGCCGGTGCACTCGGTTACCGGCCTCCGGAGTTTGCTAGATCAAGCAAACCATGCCCTTCTTTGACAAGTGATGTTTATGCATTTGGAGTGGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTCTGGGATTCCAGGGGTGGTTGACCTCACTGACTGGGTGAGATTTTTGGCTGAACAAGACCGTTCAAGCCAGTGCTTTGATAGGTCTCTAGTGGACAAGCATAATGGGGAAAGATCCTCAAAAATTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGACAGGCCTGACATGAAAACCGTCTTTGATGATCTCTCAACAATAAGGTAG 3042 0.4066 MVGVGTTRKGMQAIWLMLLLLVSIALGNSDIDALLEFKKSIQNDPSGFVFNSWNSKSLDSDGCPRNWYGIWCSEGSVISITLDNAGLVGEFNFPAISGLAMLRNLSAVNNQFTGELTHAASMESLEYLDLSLNKFNGPLLSNFVQLRKLVYLNLSSNELGGTLTIEFHKLEQLKYLDMHMNNFSGDIMHIFYQMGSVLYVDLSSNRFSGALDLGLVDESFLSSIQYLNVSHNSLRGELFAHDGMPYLDSLEVFDASNNQLEGNIPSFTFVVSLRILRLAFNQLTGLLPEALLKESSMMLSELDLSRNKLEGPIGIITSVTLRKLNLSSNKLYGPLPLRVGHCAVIDLSNNTLSGNFSRIGYWGNYVEVVQLSTNTLIGMLPNETSQFLRLTELKVSNNLLEGFLPPILGTYPELKDIDLSLNQLSGFLLPSFFYSTKLINLNLSNNKFSGLIPIQVQPPNTPLVSTENISLVFLDLSHNNLSGTLPSNMSSLHNLSYLNLCNNKLEGTIPDDLPEELRVLNVSFNNFSGVVPENIKHFPESAFHPGNPMLVFPHSQSSPKDTSNLGLREHQLHKRSATRIALIACLVAGAFVMAFVGIIIYYKVHHEKEMTSKQNEARGITQESTFTSNIEAAYRNLEALPPSQRGSSDAASNIHPVGEKSMNLGSSESGKNEEGMYSPMSILSPSNPSSSKSHQFENPGSLQVSSPDKLVGDLHIFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLDSGHALAIKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEVDKTNLHPLTLDERLRVAIEVALCLHFLHDEKAIPHGNLKSTNILLETPNRDVLLTDYSLHRILTAAGTTEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSSQCFDRSLVDKHNGERSSKILDDMLKVALRCILPASDRPDMKTVFDDLSTIR 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00923 1013 ProSiteProfiles Protein kinase domain profile. 730 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00923 1013 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 72 342 - -
Phco3g00923 1013 MobiDBLite consensus disorder prediction 639 704 - -
Phco3g00923 1013 PANTHER OS07G0626500 PROTEIN 15 116 - -
Phco3g00923 1013 Gene3D Phosphorylase Kinase; domain 1 736 808 - -
Phco3g00923 1013 Gene3D Ribonuclease Inhibitor 146 216 IPR032675 -
Phco3g00923 1013 Gene3D Ribonuclease Inhibitor 29 145 IPR032675 -
Phco3g00923 1013 Gene3D Transferase(Phosphotransferase) domain 1 809 1013 - -
Phco3g00923 1013 FunFam Leucine-rich repeat receptor-like protein kinase 715 807 - -
Phco3g00923 1013 MobiDBLite consensus disorder prediction 659 704 - -
Phco3g00923 1013 SUPERFAMILY L domain-like 41 352 - -
Phco3g00923 1013 SMART LRR_typ_2 492 516 IPR003591 -
Phco3g00923 1013 SMART LRR_typ_2 146 169 IPR003591 -
Phco3g00923 1013 SMART LRR_typ_2 270 293 IPR003591 -
Phco3g00923 1013 SMART LRR_typ_2 221 241 IPR003591 -
Phco3g00923 1013 SUPERFAMILY Protein kinase-like (PK-like) 733 1009 IPR011009 -
Phco3g00923 1013 SUPERFAMILY L domain-like 300 535 - -
Phco3g00923 1013 Pfam Protein tyrosine and serine/threonine kinase 734 1004 IPR001245 GO:0004672|GO:0006468
Phco3g00923 1013 Gene3D Ribonuclease Inhibitor 217 560 IPR032675 -
Phco3g00923 1013 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00923 Phco-Chr3 7729450 7733772 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco3g00923 PK_Tyr_Ser-Thr 1.5e-27 CL0016