Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00894 ATGTCAGATGACATGCTCATTCATTTCTCTTCCAACTCTTCAAACCAATCTGATCATTCCCTGCCTACAAAAATTGCGAAGTTGGAAGCTCGTATGGTTGGTAAGGGTTCCTCAACCTCTGCTCAGCAACCAGGTTGGTCCAATGTGTCTGTTCCTTCGGCTGGGAAATTTGTTCGGGCTGCTGAAAATTCGGCTGAACCGTCAACTTCAAGTGATTCTGATGATAATGGTGGGGCATTCTTGATACAAGCCAACACACAGAAGCGCCAAAAACTTCAAGAAGATGGCAACGCCAGTGTTTTTGAACATGTTGAGGTTGTTACTGATGGAAGGCAAACTAGTTTGGATTCTGTGGAGACAAAAATGCATGTTGAAATGAATAGAAAGAAACATGGTCGTGGAAGAGGGAGTTCTGGTTCGGGTAGAGGCCGGGGTTCCAGAGTTAATGATCAGACCAAAATACTAATTTCTCCTCCAACTGTTTTGGCTTCAAATGGTCAGATCGACAAGGGTGGCAAACCCAGTGATCAGTTTCATAGTGATAATTGTGTTTCATTAGAGGATGAAGTTGCATCTTTACAAGCTAAAGTTGTTGCTTTGGAGGAGGAATTGCGTAAATCAAAGCAAGAAGCAGTTGATCATCAGAATCTTACTCAACAGTTAGAACAGGAACTGAAGGAGATGACGGATCATGAACAACAAATGAAGCCTAAGAGAATGAAAATAATATCTGACTTGCTGATATCCGTTTCAAAGGCTGAAAGACAAGAAGCAAGGCTGAAAGTACGACAAGACTCATTGAGACTTGGGAATGTTGGTGTAATCAGAGCTGGAACTGTAATATCTGAGACCTGGGAAGATGGTCAAGCTTTAAAGGATCTGAATACCCAGCTTAAACAACTAGTAGAAACAAAGGAGGCGATAGAGCGGCAGCGCAAATTATTTAAGAAAAAGCAATCTGATAAGGGTGATGGGACAGATGCAGAGGCTGGATTGCCAGAAGATATTCTGATTCACGATGAAATTTACAAATGTCGATTAGCTAGCCTTAAAAGAGAAGAGGAAATCGTTTTGCGAGAGAGGGATCGATATGAAATAGAGAAGGGGAGGTTAATTCGGGAGATGAAACGCATACGAGATGAAGATGGTTCACGGTTTAACAACTTTCAGATTCTAAATCATCGTTATGCCCTTCTTAACCTTCTTGGGAAGGGAGGATTCAGTGAGGTGTACAAGGCTTTCGATTTGGTGGACCATAGATATGTTGCGTGCAAACTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGGCATGCAATTCGGGAGTATAATATTCACAAGACTCTTGTACATCGCCACATTGTTCGTTTGTGGGACATCTTTGAGATTGATCAAAACACATTCTGCACCGTTCTAGAGTATTGTAGTGGGAAGGATCTTGATGCTGTTCTTAAAGCAACACCTATATTATCTGAGAGGGAGGCTAAGGTTATCATAGTTCAGATTTTTCAAGGCCTCATTTACATGAATAAAAGAGCACAGAAGATTATCCATTATGATTTGAAGCCTGGAAATGTTCTGTTTGATGAGCTTGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTAAGATAGTGGAGGATGATGTGGGATCCCAAGGTATGGAACTTACATCCCAGGGAGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGTATTTTGTATTATCAAATGCTCTTTGGCCGACGTCCTTTTGGGCATCACCAAACCCAAGAGAGAATACTTCGTGAGGACACAATTATTAAGGCTCGCAAGGTTGACTTTCCTTCTAGACCTACCATTTCTAACGAGGCAAAGGATTTTATCCGAAGGTGTCTGACATATAACCAGGCTGAGAGACCAGATGTGTTAACCATTGCTCAAGACCCATATCTCACTTTCTCAAAGAAGTAA 2025 0.4163 MSDDMLIHFSSNSSNQSDHSLPTKIAKLEARMVGKGSSTSAQQPGWSNVSVPSAGKFVRAAENSAEPSTSSDSDDNGGAFLIQANTQKRQKLQEDGNASVFEHVEVVTDGRQTSLDSVETKMHVEMNRKKHGRGRGSSGSGRGRGSRVNDQTKILISPPTVLASNGQIDKGGKPSDQFHSDNCVSLEDEVASLQAKVVALEEELRKSKQEAVDHQNLTQQLEQELKEMTDHEQQMKPKRMKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNTQLKQLVETKEAIERQRKLFKKKQSDKGDGTDAEAGLPEDILIHDEIYKCRLASLKREEEIVLRERDRYEIEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILSEREAKVIIVQIFQGLIYMNKRAQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILYYQMLFGRRPFGHHQTQERILREDTIIKARKVDFPSRPTISNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTFSKK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00894 674 MobiDBLite consensus disorder prediction 35 50 - -
Phco3g00894 674 SUPERFAMILY Protein kinase-like (PK-like) 388 670 IPR011009 -
Phco3g00894 674 SMART serkin_6 396 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00894 674 MobiDBLite consensus disorder prediction 63 79 - -
Phco3g00894 674 Coils Coil 347 381 - -
Phco3g00894 674 FunFam Serine/threonine-protein kinase TOUSLED 387 674 - -
Phco3g00894 674 MobiDBLite consensus disorder prediction 127 151 - -
Phco3g00894 674 MobiDBLite consensus disorder prediction 1 21 - -
Phco3g00894 674 Coils Coil 291 318 - -
Phco3g00894 674 Pfam Protein kinase domain 397 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00894 674 CDD STKc_TLK 395 668 - -
Phco3g00894 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Phco3g00894 674 MobiDBLite consensus disorder prediction 58 79 - -
Phco3g00894 674 PANTHER MIXED LINEAGE PROTEIN KINASE 10 671 - -
Phco3g00894 674 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
Phco3g00894 674 Gene3D Transferase(Phosphotransferase) domain 1 387 674 - -
Phco3g00894 674 Coils Coil 183 234 - -
Phco3g00894 674 MobiDBLite consensus disorder prediction 32 51 - -
Phco3g00894 674 ProSiteProfiles Protein kinase domain profile. 396 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00894 Phco-Chr3 7545499 7552949 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Phco3g00894 Pkinase 2.5e-60 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00894 3 7545499 7552949 Phco3g00894 3 7545499 7552949 ECH