Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00884 ATGGAACTCAAAAAAGGGTTGCTGCTGTTATTTTTGTTGCTGGAGTATGTTTGTTGCAATGTTGAAGCAAAGTGTTTGAAGGGATGTGGTGCAGCTTTAGCTTCCTATTATGTGAATCCAGGGCATTCACCCTTGGATAATATAACACACTTGATGAAATCAAGTGTTCTGTCCAATTCTGACGTTATAGTAAGCTACAATAAAGACAGAATATTCAATAAAAATCCCCTCTCCTTTTACAGAATCAATATTCCATTTCCCTGTGACTGTATCCGTGATGAGTTTCTGGGGCATGTGTTTGAGTACTCAGCTGCTGCAGGTGACACCTATGATTCGATTGCCAAAGTGACATATGCCAATCTCACCACTGTTGAACTTTTGAGGAGGTTCAACAGTTATGGCCAAAATGGTATACCCGCAAATGCCAAGGTTAATGTCACGGTCAATTGTTCTTGTGGAAACAGCCAAGTTTCACAAGACTATGGGTTGTTTATTACCTATCCACTTAGGCCTGGCAATAATCTGCATGATATTGCCAACGAGACTCAACTTGATGCACAGTTGCTGCAGAATTATAATCCTGGAGTCAATTTCAGCCAAGAGAGTGGGATTGTTTTCATTCCAGGAAGAGGTCTATCTAGGGGTGCTGCTGCTGGAATATCCATAGCAGGAATATGCGGTCTTCTATTATTAGTAATTTGCATTTATGTTAAACTCTTCCAGAAGAAGGAAGGAGAGAAACCTAAATTGCCCACAGAAAATTCTATGGCGTTTTCAACTCAAGATGCCTCTGGAAGTGCAGAATATGAAACTTCAGGATCCAGTGGGACTGCTACTGCTGCTGGGCTTACAGGCATTATGGTGGCAAAATCAATGGAGTTCACATATCAAGAACTAGCAAAAGCTACAAATAACTTCAACTTAGAAAATAAAATTGGTCAAGGTGGATTTGGAGCTGTATATTATGCAGAATTGAGAGGCGAGAAAACTGCAATTAAAAAGATGGACGTGCAAGCATCCACTGAATTTCTTTGTGAGTTGAAGGTCTTAACTCATGTTCATCACTTGAATCTGGTGCGTTTGATTGGATATTGCGTTGAGGGATCTCTTTTCCTTGTGTATGAATACATTGACAACGGAAACTTAGGCCAATATTTGCATGGTATAGGGAAAGATCCTTTGCCATGGTCTAGCAGAGTGCAAATTGCGCTAGATTCAGCAAGAGGCCTTGAATATATTCACGACCACACTGTGCCAGTGTATATCCATCGTGATGTAAAATCTGCAAACATCTTAATAGACAAAAACTTCCGTGGAAAGGTAGCAGATTTTGGATTGACTAAACTTATTGAAGTTGGAGGCTCCACACTTCACACTCGCCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGACGTCTCTCCAAAAGTAGATGTATATGCTTTTGGAGTGGTTCTTTATGAACTTATTTCTGCAAAGAATGCTGTTCTGAAAACAGGTGAATGTGTTGCTGAATCCAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTCAGAAGTTATTCGCAAACTGGTGGATCCCAGGCTTGGAGAAAACTATCCAATTGATTCAGTTCTCAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAATCCACTACTACGTCCAAGTATGAGGTCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTTGGACGATGAAACTGCTTCCTACGAAAATCAAACTCTCATAAATCTACTGTTTGTGAGATGA 1818 0.4032 MELKKGLLLLFLLLEYVCCNVEAKCLKGCGAALASYYVNPGHSPLDNITHLMKSSVLSNSDVIVSYNKDRIFNKNPLSFYRINIPFPCDCIRDEFLGHVFEYSAAAGDTYDSIAKVTYANLTTVELLRRFNSYGQNGIPANAKVNVTVNCSCGNSQVSQDYGLFITYPLRPGNNLHDIANETQLDAQLLQNYNPGVNFSQESGIVFIPGRGLSRGAAAGISIAGICGLLLLVICIYVKLFQKKEGEKPKLPTENSMAFSTQDASGSAEYETSGSSGTATAAGLTGIMVAKSMEFTYQELAKATNNFNLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGIGKDPLPWSSRVQIALDSARGLEYIHDHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLIEVGGSTLHTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKNAVLKTGECVAESKGLVALFEEALNQSNPSEVIRKLVDPRLGENYPIDSVLKIAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDLDDETASYENQTLINLLFVR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00884 605 Gene3D Phosphorylase Kinase; domain 1 286 376 - -
Phco3g00884 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Phco3g00884 605 Gene3D Transferase(Phosphotransferase) domain 1 377 599 - -
Phco3g00884 605 ProSiteProfiles Protein kinase domain profile. 306 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00884 605 MobiDBLite consensus disorder prediction 253 276 - -
Phco3g00884 605 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Phco3g00884 605 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 588 IPR044812 GO:0019199|GO:0045087
Phco3g00884 605 SMART serkin_6 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00884 605 FunFam PTI1-like tyrosine-protein kinase 3 377 590 - -
Phco3g00884 605 SUPERFAMILY Protein kinase-like (PK-like) 288 576 IPR011009 -
Phco3g00884 605 MobiDBLite consensus disorder prediction 248 276 - -
Phco3g00884 605 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Phco3g00884 605 FunFam LysM receptor kinase 2 285 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00884 Phco-Chr3 7441487 7445734 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco3g00884 PK_Tyr_Ser-Thr 7.9e-44 CL0016