Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00883 ATGGAGAACAGATTCAGTTTATCAGCTTTCTTCATGTTATGGGCTATGGTGCTTAGTGCAGAATCCAAGTGTAAGAAGGATTGTGATTTAGCTCTAGCTTCCTACTATCTAACAGGAGGTGATTTGACATATATATCAAAGCTTATGGAATCTCAGGTTCTTTCAAAAGCTGAAGATATTCTCCCCTACAACACTGAAACCATAAAAAACAAAGACCAGTTGCAAGCCTATACCAGAGTGAACGTTCCATTCCCTTGTGATTGCATTGGAGAGTTTCTTGGCCATATATTCCATTATGACGTTGTATCAGGTGACACTTACATGTCCATTGCCAGTAATTATTCCGATTTGACCACTACTCAGTTGTTGCAGAGCTTCAACTCATATTCACCAACTAGTATTCCTGATACCGTGACTCTTGATGTCTTCATTAACTGTTCCTGTGGGAATAGTGAAGTTTCCAAGGATTATGGATTGTTCATCACATACCCGCTTAGACCTGATGATTCTTTGCAGTCAATTGCCAACAAGACTGGGATAGAGGGTGACTTGCTGCTTAAGTACAACCCGGGTGTAAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGGAAAGACCAAAATGGTGGCTATGTGCCCCTTCATCTAAGAACCGGAGGTCTTGCACTTCGAGTTATCGCTGGAATATCTGTTGGAGTAGTAACGACACTTCTGCTATTGGCATTTTGTGTGTATGTTACGTATTACCGAAGAAAGAAGAATTTGCTCCCAGAAGAATTCATGATGAACTCGGCTAGAGTTAAGAATGATGAAGCCTCTGGTGGTCCTGATGCAGAAAATGGAGCCAACACCATCAGGGTGGACAAATCAGGAGAGTTTTCATATGAAGAACTAGCCAATGCCACAAATAACTTCAGTCTGGCTAATAAAGTTGGTCAAGGTGGTTTTGGGGAAGTCTATTACGCAGAGCTTAATGGCGAGAAGTCCTCCCTAATTACACAGAAAGTTGCAGTAAAAAAGATGGACTTGCAAGCATCCAGAGAATTTTTAGCTGAACTGAAAGTGTTGACACGTGTTCATCACTTGAACCTGGTGCGCTTGATTGGATATTGTATTGAGGGTTCCCTTTTCCTTGTTTATGAATACATTGAGAATGGCAACTTAAGACAACATCTACGTGGATCAGGTTTTGATACTTTGCCATGGTCGGCCCGAGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTGCAGTACATTCATGAACATACTGTGCCTGCATATATCCATCGCGACATAAAGTCAGACAACATTTTAATAGACAAAAAATTATGTGCCAAGGTTGCAGACTTTGGTTTAACCAAGTTGATTGATGTTGGAAGTTCATCACTTCACACAGCTAATATGAAGGGCACATTTGGTTACATGCCACCAGAATATGCATATGGCAATGTTTCTCCCAAAATAGATGTCTATGCTTTCGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGAAGCATTGTTCATGGGTGGTGTACGTGGTGCTGAATCAAAGGGCCTTGTGTCTTTGTTTGACGAGGCTTTTGATGAGCAAGATCCCACAGAAGGTCTTAAAAAACTGGTGGATCCTAGGTTAGGAGATAACTACCAAATCGATTCAGTTAGTAAGATGGCACAACTTGGCAAAGCATGCACAGAGAGTAATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCACTTACTTCAACTAGTGAGGATTGGGATATTGCTTCCATCATGGAAAATCCAACTCTAGCAAATCTAATGTCTGGGAAATAG 1836 0.4107 MENRFSLSAFFMLWAMVLSAESKCKKDCDLALASYYLTGGDLTYISKLMESQVLSKAEDILPYNTETIKNKDQLQAYTRVNVPFPCDCIGEFLGHIFHYDVVSGDTYMSIASNYSDLTTTQLLQSFNSYSPTSIPDTVTLDVFINCSCGNSEVSKDYGLFITYPLRPDDSLQSIANKTGIEGDLLLKYNPGVNFSQGSGLVYIPGKDQNGGYVPLHLRTGGLALRVIAGISVGVVTTLLLLAFCVYVTYYRRKKNLLPEEFMMNSARVKNDEASGGPDAENGANTIRVDKSGEFSYEELANATNNFSLANKVGQGGFGEVYYAELNGEKSSLITQKVAVKKMDLQASREFLAELKVLTRVHHLNLVRLIGYCIEGSLFLVYEYIENGNLRQHLRGSGFDTLPWSARVQIALDSARGLQYIHEHTVPAYIHRDIKSDNILIDKKLCAKVADFGLTKLIDVGSSSLHTANMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISAKEALFMGGVRGAESKGLVSLFDEAFDEQDPTEGLKKLVDPRLGDNYQIDSVSKMAQLGKACTESNPQQRPNMSSVVVTLTALTSTSEDWDIASIMENPTLANLMSGK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00883 611 FunFam LysM receptor kinase 2 285 383 - -
Phco3g00883 611 ProSitePatterns Protein kinases ATP-binding region signature. 312 341 IPR017441 GO:0005524
Phco3g00883 611 Gene3D Phosphorylase Kinase; domain 1 291 383 - -
Phco3g00883 611 Pfam Protein tyrosine and serine/threonine kinase 308 582 IPR001245 GO:0004672|GO:0006468
Phco3g00883 611 SMART serkin_6 306 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00883 611 ProSiteProfiles Protein kinase domain profile. 306 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00883 611 Pfam LysM domain 99 132 IPR018392 -
Phco3g00883 611 FunFam PTI1-like tyrosine-protein kinase 3 384 597 - -
Phco3g00883 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Phco3g00883 611 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 597 IPR044812 GO:0019199|GO:0045087
Phco3g00883 611 Gene3D Transferase(Phosphotransferase) domain 1 384 601 - -
Phco3g00883 611 SUPERFAMILY Protein kinase-like (PK-like) 288 583 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00883 Phco-Chr3 7433686 7438905 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco3g00883 PK_Tyr_Ser-Thr 9.8e-48 CL0016