Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00836 ATGATTTCCCTGTTGTTTTCAAATGGCTTCTTTCTTTCCCACCGCGCCATCCCTACAAAACCCCCTCCACAACAAACCCCATCTTTCTATTCCCTCAAAGTTCGATGCTTTCGTGCTTCTGATCCAAACCCAGTTCCCGGTTTCCCTCCTCCGAGTTCTGTTCTCTCGCCACGTTCCCTCAAACGGGTCCCTCGCCTCTTGAAGACCGAACTTCAACGCGCTCTAATGGATTACCTGCATTTCACGCGCGGCTACACCTTCTCCGACGCCGAGTACATCAGCGTGAACTCGCCTCGTTTTGTTGAATCATTGGTGTCAATGATTGACGACAAAGACGACGTTCCCCGATCGTTGCGGAAGTTCTTCAGGTACAACCCCATTAACGAGTTTGAACCGTTTTTCGAGAGTTTGGGAATTGACCCTTCTGAGTTGCATTTGTTTCTCCCCCATGGCATGATTTTCTTGGCTGATGATCACGTGTTACTTTATAATTTTCATGTTTTGTGTAACTATGGGGTGCCAAGGAATAGAATGGGCAGGTTTTATAAAGAGGCAAAAGAAATTTTTGGGTATGCTGGTGGGTTGTTGGAGTCAAAGTTGCAAGGTTATGGTAATTTAGGTTTGAGTAGATCAACTGTTGTGAAGCTTGTTGTTTGCTGTCCTTTGCTTTTGGTTGGTGATGTCAATTGTGAATTAGTTGTTGTGCTTGATTGGCTGAAAAGAATTGGGATTGAAAGTGATTGGATGGTAAATTACTTGTCTTGTTCAAAGACATATAGTTGGAAAAGAATGCTTGATGCCTTGCAGTTTCTTCATAAAGTGGGTTATTCCGAGGAACAAATCCACAATTTGATTAGGGGAAATCCTAAACTGTTGTTGGAAGGTATTGGGAAGAAGGTGTACTTATTTTTTGGCCGATTGGTCAAAGTTGGTGTTGAGATGAATGTGATTCATTCTTATTTTGTGGAGTATCCCAATATCTTGTCATATAAGTGTGCGAAAAATATGTTGAGAGTTGTTGGCTTTTTGTGTGCTATCGGAATGGGAAAAGATGACATTGCTCACATTTTCTCTAAGTACGTGCATCTCTTGAGTACATGTTCCTTGAAAGGTCATAAAACTGTTTGTCAGGAGTTAAAAGTTGGAAAAGCTGATTTGTGCCAAATCATAAGGGATGATCCATTGAAACTAATTAGTTTTTCATCGAAGCAGCAACAGAAGAGCGATGGAAAGGTAGATAGTCATGACCCACGGAATTATTTGGAAAAAACAACTTTCTTACTGAAATTGGGATATACTGAAAACTCTGAAGAGATGGCAAGAGCATTAAGAATGTTCCGAGGGAGAGGTGATCAATTACAAGAAAGGTTTGATTGCCTGGTAGAAGCTGGTTTGGACTATAATAGTGTGATTGAAATGATAAAACGAGCTCCTATGATTCTAAGCCAGAACAAAGCTGTAATTAAAAGGAAGATTAATTTCTTAAGAAATGTTTTAGATTACCCACTAGAATGTCTCGTGGGATTCCCAACATACTTTTGCCATGATTTGGACAAAATTGTTGAAAGACTTTCAATGTATGCGTGGCTGAAGGAGAGGAATGCCATAAATCCTACGTTAACCTTGAGTACCATAGTTGCATCCAATGATAAACGCTTTGTAAAGTACTTTGTGAATGTGCATCCTCAAGGTCCAGCCGTCTGGAAGAGTTTAAAAAGGTTATCTAATAAAGATAAGAACTAA 1743 0.4033 MISLLFSNGFFLSHRAIPTKPPPQQTPSFYSLKVRCFRASDPNPVPGFPPPSSVLSPRSLKRVPRLLKTELQRALMDYLHFTRGYTFSDAEYISVNSPRFVESLVSMIDDKDDVPRSLRKFFRYNPINEFEPFFESLGIDPSELHLFLPHGMIFLADDHVLLYNFHVLCNYGVPRNRMGRFYKEAKEIFGYAGGLLESKLQGYGNLGLSRSTVVKLVVCCPLLLVGDVNCELVVVLDWLKRIGIESDWMVNYLSCSKTYSWKRMLDALQFLHKVGYSEEQIHNLIRGNPKLLLEGIGKKVYLFFGRLVKVGVEMNVIHSYFVEYPNILSYKCAKNMLRVVGFLCAIGMGKDDIAHIFSKYVHLLSTCSLKGHKTVCQELKVGKADLCQIIRDDPLKLISFSSKQQQKSDGKVDSHDPRNYLEKTTFLLKLGYTENSEEMARALRMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILSQNKAVIKRKINFLRNVLDYPLECLVGFPTYFCHDLDKIVERLSMYAWLKERNAINPTLTLSTIVASNDKRFVKYFVNVHPQGPAVWKSLKRLSNKDKN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00836 580 PANTHER CGI-12 PROTEIN-RELATED 266 561 IPR003690 GO:0003690|GO:0006355
Phco3g00836 580 FunFam mTERF family protein 107 258 - -
Phco3g00836 580 Pfam mTERF 268 497 IPR003690 GO:0003690|GO:0006355
Phco3g00836 580 Pfam mTERF 450 553 IPR003690 GO:0003690|GO:0006355
Phco3g00836 580 FunFam Transcription termination factor MTEF18, mitochondrial 303 571 - -
Phco3g00836 580 Gene3D Transcription termination factor 3, mitochondrial 95 293 IPR038538 -
Phco3g00836 580 Gene3D Transcription termination factor 3, mitochondrial 298 571 IPR038538 -
Phco3g00836 580 SMART mt_12 471 502 IPR003690 GO:0003690|GO:0006355
Phco3g00836 580 SMART mt_12 318 349 IPR003690 GO:0003690|GO:0006355
Phco3g00836 580 SMART mt_12 214 245 IPR003690 GO:0003690|GO:0006355
Phco3g00836 580 SMART mt_12 436 466 IPR003690 GO:0003690|GO:0006355
Phco3g00836 580 SMART mt_12 503 534 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00836 Phco-Chr3 6959580 6961322 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco3g00836 mTERF 2.2e-10 No_clan