Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00765 ATGGAAAAGAACAGGAAACTCAGTCGGTTGCAGGATCTTTATATAGCTTGGCGCCTTGTGGCGGTTTTTTTCTTGTTTCAGAACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTGAGGCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTTGATGATGAGGCATCTTTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGCCTTGAATTTGAAGGATCTCTGCCTTGAAGGAACTCTGGCACCTGAGCTTGTGAAACTTGTCCACATAAACTCCATTATTTTGCGGAACAACTCTTTCTCTGGGACCATCCCTGAAGGATTTGTGGAGTTAAAAGAATTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACTTCTACCAGCTGATCTTGGGACTAATATCTCCCTAGCAATCCTTTTGCTGGATAACAATGAATTTCTTGTTGGTTTCTCTCCGGAAATCAATGAACTGAGGATGCTTTCTGAGTGCCAAGTAGATGAAAATCAGCTAACTTATGCTGCTAAAATGCCAGCTTGCATAGAAAGAGCCACCACATGGCATATTGGTCAAGGTAAAGGTCCTACTCGTGGCCTACTTCAACGTCCAAAACTATTTCATCGTGAAAATAATGACTCTCGTAATCGTGCGGTTGATCCACCTCAAGAGAAGCCTTCTCCTCCTTTACTAGTGCCAAGGCTAACTCCCCCTGAGAAGAATGCTTCTAGTTCTCCTTCTCCCCATTCTATACCAGGTTCTGGAGCACAATCTAAAACTGAAAAAAGCACTTCGCCAAAGTTTCATATGTTGGTTGGAGTTATAGGTGGTGCAGTGTTTCTTCTTTTTTCATCCATTGGCATATATATTTGTAAAACAAAGGTGGCTAATGTCAGACCTTGGGCCACGGGACTAAGTGGACAGCTTCAGAAGGCATTTGTAACTGGTGCGCAAAAGCTAAGGAGATTGGATCTTGAAGTAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCTATTGGCACACTGTACAAAGGAACTTTGTCCAGTGGAGTTGAAATAGCTGTAACTTCTGTTCCGGTGACATTATCCAAGAATTGGTCAAAGACTTTAGAAGTTCAATTTAGAAACAAGATAGATACGTTATCGAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGATACTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAATGGAACACTATTTGAGCATTTACACATAAAAGAGGCTGAGCACTTGGATTGGTTAACAAGGCTTAGAGTTGCAACGGGTATGGCTTATTGCTTGCAGCATATGCACCAATTGGATCCTCCTATGGCCCTTATCAAGCTGAATTCTCAAGCTGTTTACTTGACTGATGACTATGCTTCCAAACTCTCAGATTTGAGTTTCTCCTATGACATAACCTCAGCTGAGAGAAAAGCTATTCACATGCCAAAAGCAACTCTCGAAAGTAATGTTTATAGCTTTGGTGTTTTGTTATTTGAGATGGTTACTGGTCGTCTCCCTTATTCAGTGGAACAAAGGGACTCACTTGAAAACTGGGCATCACACTATTTACAAGGAGACCAACCCCTCAAAGATATGGTGGATCCAATTCTTGTATCTTACCAAGAGGATCAGCTGGAACAAGTTGCTGCATTGATTAGATCTTGTGTGCATCCTGATCCAAAGCAAAGACCAACAATGAAAGATGTCAGTGAGAGACTAAGAGAGATAACAAAGATAACACCTGAATCAGCAGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTGTACAGAAGCGCTTTGA 1905 0.4142 MEKNRKLSRLQDLYIAWRLVAVFFLFQNLGLCCSLNEEGKALLKLRQRIVSDPFGALSNWVDDEASFDPCNWFGVECSDGRVVALNLKDLCLEGTLAPELVKLVHINSIILRNNSFSGTIPEGFVELKELEVLDLGYNNFSGLLPADLGTNISLAILLLDNNEFLVGFSPEINELRMLSECQVDENQLTYAAKMPACIERATTWHIGQGKGPTRGLLQRPKLFHRENNDSRNRAVDPPQEKPSPPLLVPRLTPPEKNASSSPSPHSIPGSGAQSKTEKSTSPKFHMLVGVIGGAVFLLFSSIGIYICKTKVANVRPWATGLSGQLQKAFVTGAQKLRRLDLEVACEDFSNVIGTSPIGTLYKGTLSSGVEIAVTSVPVTLSKNWSKTLEVQFRNKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWLTRLRVATGMAYCLQHMHQLDPPMALIKLNSQAVYLTDDYASKLSDLSFSYDITSAERKAIHMPKATLESNVYSFGVLLFEMVTGRLPYSVEQRDSLENWASHYLQGDQPLKDMVDPILVSYQEDQLEQVAALIRSCVHPDPKQRPTMKDVSERLREITKITPESAVPKLSPLWWAELEIACTEAL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00765 634 MobiDBLite consensus disorder prediction 209 279 - -
Phco3g00765 634 Gene3D Phosphorylase Kinase; domain 1 320 428 - -
Phco3g00765 634 MobiDBLite consensus disorder prediction 219 236 - -
Phco3g00765 634 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Phco3g00765 634 PANTHER PROTEIN MALE DISCOVERER 2 15 632 - -
Phco3g00765 634 SUPERFAMILY Protein kinase-like (PK-like) 332 603 IPR011009 -
Phco3g00765 634 FunFam Nuclear pore complex protein NUP107 35 194 - -
Phco3g00765 634 FunFam Inactive receptor-like serine/threonine-protein kinase 320 428 - -
Phco3g00765 634 SUPERFAMILY L domain-like 38 191 - -
Phco3g00765 634 MobiDBLite consensus disorder prediction 254 279 - -
Phco3g00765 634 ProSiteProfiles Protein kinase domain profile. 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00765 634 Gene3D Ribonuclease Inhibitor 33 204 IPR032675 -
Phco3g00765 634 Gene3D Transferase(Phosphotransferase) domain 1 429 615 - -
Phco3g00765 634 Pfam Protein tyrosine and serine/threonine kinase 349 603 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00765 Phco-Chr3 6355256 6358793 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phco3g00765 PK_Tyr_Ser-Thr 6.1e-22 CL0016