Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00762 ATGAAGGGTTACGAGCCACGTTCAAGTTCCTCTTGTGCAGCCTGCAAGTTCTTGAAGAGACGATGCATACCAAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTGCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATCGAAGTTCCTGAGGAGCAGAGAGAGGACACCGTGAATTCTCTTGCTTATGAAGCAGAAGCCAGGCTTAGGGACCCCATTTATGGATGTATTGGTGCCATAGCTCTTCTACAGAGGAAGATGGTGGAGCTTCAACACGACCTTGCCATTGCTAAGGACCGTCTTGCTCGTTATGCTGCTGCTGCCACCACTCCTTCCACCACCACCACCACCACCACCACCACCACCAATACCTTCAATTCCCATGTTAGTTTGCCACCCTTCCCTGAATTTTTCTCTTGCACCGATTTCAACGACAACTTCTTCCACAACTCTTCCTCTCAATCTCCGCCATTGACCAGACATGAAATGGTCGATGATTTCATTCCAATCCCTTATATATTATGA 555 0.4721 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPIYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSTTTTTTTTTTNTFNSHVSLPPFPEFFSCTDFNDNFFHNSSSQSPPLTRHEMVDDFIPIPYIL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00762 184 Coils Coil 90 117 - -
Phco3g00762 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 130 - -
Phco3g00762 184 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Phco3g00762 184 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00762 Phco-Chr3 6329073 6329627 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco3g00762 LOB 1.3e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00762 3 6329073 6329627 Phco3g00762 3 6329073 6329627 ECH