Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00647 ATGGGGGAAAATCGTGAGATAGAGGAGAACGAAACAGGCAAAGGACGAAGGGACGTGGAGATCATTTATGAGTTGAAGCAGAACCAAACATGCACCACTAGAATTCAAGATTGCTTCTGGGGCAGAACAGACTCGCTATTGTTTGCTGCTTATGGTTCCAAATGTGCAGGAACATTTAACACAAATACACAAGTAGCTCCATTCCTTTATGTCATCACAAATGGTAGAAGTAAGCTCTTGGAGTGTGCCTTGATAGGGGTTGATGGAAGCTTCTTCTACATGGATCCACTTCTGCAGTATATCATCATCCCTGTGAAACACAAAGAGACCCCATTTTGGAACCTAGCCATTATCATATTTTTCTCAGCTTCAGTTCAGCACTTGATCTTTGCATGTGATATCATGGGGTCTCACTATCAGTACTGGATGCATGTGAGGAGGGAACAAATCATGAATTCACACTCACATAAAGCACCAATTATTGGAGATGTCAGGAAGAACAATTGGGAAGAAAGGGCTTTTGCAGAAGACGCAACTAGGAGGAGTCTTGGTGGGAGCATGTGGCCTCCAAGATCTTACTCTTGCATCTTTTGTAAGAGAGAGTTCAGGTCTGCTCAAGCTCTTGGGGGTCACATGAATATCCACAGAAGGGACAGGGCTAGGCTCAAACAAAACCTCAGAGCTCATCACAATTATGAACCCTTTTCTCATCATTACCATCACGAAAATGATGACAGCATCCAATCCTTATTAGGTAATAATCATCATTTTTCTGCACCAGTGATCTCCACCCAGTTAAATTGTGGTCTAACTCATGCTCATAACTACTCTAGCCAAGCAACTACAATTTCAACAACCAGATCACTCTCATGTATATCCACACAAGAAACCTGTGGTCGGCATAAATTTTCACCTTCTTCTTCTTCTTTTATCTTGGGACAAATGGGGTCTCCTAATTCAGAACAAGAAAGGGAGGTCAAAGCAAAGGAGTACAATTTTAAAGGCTTGGGATGTAGTAATTTTGTTGAAACAAGTTTGTCTGTGGGTCTGACTTCTATGTTTGGCCAAAATTCATCACCAATCGTTCCTTGTGGGGACAGACCCAAAATCAGTTGCAAGAGACTAAAAAATACCATTTCTTCTCTTCCTCTTTTCCTCAGACCATGTTCAAAGGACAAAGGCCTGGCTTTTCAACCTGTCGAAATCTCACTTGGACTTGATCATGGAATCGAAGACTTGGATCTTGAACTCAGGCTAGGGAAACAGCACAATGTTAAGTAG 1281 0.42 MGENREIEENETGKGRRDVEIIYELKQNQTCTTRIQDCFWGRTDSLLFAAYGSKCAGTFNTNTQVAPFLYVITNGRSKLLECALIGVDGSFFYMDPLLQYIIIPVKHKETPFWNLAIIIFFSASVQHLIFACDIMGSHYQYWMHVRREQIMNSHSHKAPIIGDVRKNNWEERAFAEDATRRSLGGSMWPPRSYSCIFCKREFRSAQALGGHMNIHRRDRARLKQNLRAHHNYEPFSHHYHHENDDSIQSLLGNNHHFSAPVISTQLNCGLTHAHNYSSQATTISTTRSLSCISTQETCGRHKFSPSSSSFILGQMGSPNSEQEREVKAKEYNFKGLGCSNFVETSLSVGLTSMFGQNSSPIVPCGDRPKISCKRLKNTISSLPLFLRPCSKDKGLAFQPVEISLGLDHGIEDLDLELRLGKQHNVK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00647 426 SUPERFAMILY beta-beta-alpha zinc fingers 190 220 IPR036236 -
Phco3g00647 426 PANTHER OS07G0101800 PROTEIN 165 422 - -
Phco3g00647 426 ProSiteProfiles Zinc finger C2H2 type domain profile. 193 220 IPR013087 -
Phco3g00647 426 ProSitePatterns Zinc finger C2H2 type domain signature. 195 215 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00647 Phco-Chr3 5243645 5252122 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02064 3 46277198 46278115 Phco3g00647 3 5243645 5252122 ECH
Phco3g00647 3 5243645 5252122 Phco3g00647 3 5243645 5252122 ECH
Phco2g02689 2 56507455 56508313 Phco3g00647 3 5243645 5252122 PCT