Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00640 ATGGCTTCAAGCTCCCACAACAACAACAAGGAGAACTCTTCTTGGACACGCATGCAGAACAAGCAATTCGAAAGCGCACTTGCCTTGTATGATCAAGACACCCCAGATCGATGGCAGAACATAGCCAGAATACTTGGTGATAAATCTGCTGAGGAAGTCAAGAAACACTATGAAATCCTTCTGGAAGACCTTAGGCATATAGAATCTGGACGTGTTCCAATCCCCAGCTACAAGTCCACTCATCATCGTAATAATGAAGAGAGGCCTCTCAAGTATCTTAATCAGCAGTGA 291 0.4433 MASSSHNNNKENSSWTRMQNKQFESALALYDQDTPDRWQNIARILGDKSAEEVKKHYEILLEDLRHIESGRVPIPSYKSTHHRNNEERPLKYLNQQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00640 96 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
Phco3g00640 96 SUPERFAMILY Homeodomain-like 13 69 IPR009057 -
Phco3g00640 96 MobiDBLite consensus disorder prediction 73 96 - -
Phco3g00640 96 CDD SANT 14 61 IPR001005 -
Phco3g00640 96 Gene3D - 6 74 - -
Phco3g00640 96 ProSiteProfiles Myb-like domain profile. 7 61 IPR001005 -
Phco3g00640 96 SMART sant 11 63 IPR001005 -
Phco3g00640 96 FunFam Transcription factor SRM1 7 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00640 Phco-Chr3 5172147 5173717 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco3g00640 None None None