Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00600 ATGAGTTTCTGTGCTGATCATACCAAGGGTGTTTCCAATGCACATGTTTCCTCTGCAGTTGGAAATGACTCTTTTGAGCACAAAAGGCTCAAACTCATGACCCTTTTGAGAAAAATCATGTGGGACTTTGCCTTGGCATGTGTTGGTGTTGGTCCTTATGGTGGCAACAACGATCATAACGGTCAAAGGAAGACAACTTTGGAGCATAACAAGGCGTGGTTGCTGGCGGAGTCTGGAGCAGAATTGGCAAGTGCTGACCCTCAATCGGTTCACTCATCCTTCAGGTTCAGCTTCTGCTCTCAGGTAGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTTCTGCTGCTGCCGCTGCAACCTTTTTGATGGTAAATTTGGAATATGAATCTCAAGTTAAGGAGACGAAATGGAGAACACATTCACTGGAGAAAAGCATATCTCCAGTCTTCAACCCTTTGACCAGGTTCAGCTATGGTGAAATTCTGTCAGCTACTAAAAAATTTTCCGAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCTTTGGAGGACTGCCGTTGCCATTAAAAGGTTGGACAAGGAAGACAAGGAGTGTGCTAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCATAACACAAATGTTGTTCCTCTAGTGGGGTTCTGTATTGACTCAGAGGAGGGTTTGTTTTTGGTATACAAGTATGTGTCAGGGGGCAGCTTAGAGCATCACTTGCATGGGAAGAAGAAAGGTGTGAAGGGTAGTTCATCACTTCCATGGTCTGTGAGATATCAAGTTGCAATTGGCATCGCAGAAGCCGTGGCTTATCTGCATAATGGAACAGAAAGGTGTGTTGTTCATAGAGACATTAAGCCTTCAAACATTCTGCTCTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGATTAGCTACATGGACTTCTGCCCCGTCAGTTCCTTTTCTTTGCAAAACTGTCAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTGTCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAAACCCCCTGGAGAGGAAAACTTGGTAGTATGGGCTAAACCTTTGCTTAGGAAAGGGAAAGGAGCCCTTGAAGAGTTGCTTGATCCTCAAGTCAAGTACAATTCGAGTTACATAGATCAAATGGCTCGGATGGTTGATGCAGCAGCTGCCTGTGTTACAAATGAAGAATCTAGGAGGCCTAGCATAGGTGAGATTGTTGCAATACTGAAAGGTGAAGTTGAGCCTGTGTTCTCTAGAAGAAGGAAGTCTGGTTATCTTGGTAATGGATTTGTGATTGATTATTACCCTCAGTTACAACAAACAAATAATGAGATGAAAAGTCATTTGGCCTTGGCAATGCTTGGAGTTCCAGAGTGTGAGGATGATGATTTTCTCTATGGTCGTTGA 1524 0.4337 MSFCADHTKGVSNAHVSSAVGNDSFEHKRLKLMTLLRKIMWDFALACVGVGPYGGNNDHNGQRKTTLEHNKAWLLAESGAELASADPQSVHSSFRFSFCSQVEVESFNMSSSASAAAAATFLMVNLEYESQVKETKWRTHSLEKSISPVFNPLTRFSYGEILSATKKFSEERVLGRGALSCVFRGRVGLWRTAVAIKRLDKEDKECAKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGKKKGVKGSSSLPWSVRYQVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKKPPGEENLVVWAKPLLRKGKGALEELLDPQVKYNSSYIDQMARMVDAAAACVTNEESRRPSIGEIVAILKGEVEPVFSRRRKSGYLGNGFVIDYYPQLQQTNNEMKSHLALAMLGVPECEDDDFLYGR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00600 507 Pfam Protein kinase domain 169 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00600 507 Gene3D Transferase(Phosphotransferase) domain 1 246 459 - -
Phco3g00600 507 PANTHER OS01G0750732 PROTEIN 104 453 - -
Phco3g00600 507 SMART serkin_6 168 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00600 507 FunFam Putative receptor-like serine/threonine-protein kinase 246 463 - -
Phco3g00600 507 FunFam probable serine/threonine-protein kinase PBL7 130 245 - -
Phco3g00600 507 Gene3D Phosphorylase Kinase; domain 1 153 245 - -
Phco3g00600 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Phco3g00600 507 SUPERFAMILY Protein kinase-like (PK-like) 153 453 IPR011009 -
Phco3g00600 507 ProSiteProfiles Protein kinase domain profile. 168 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00600 Phco-Chr3 4839056 4841290 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco3g00600 Pkinase 1.7e-44 CL0016