Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00524 ATGGCACCTGTTTTGCCTCCCGGTTTTAGGTTCCACCCTACTGACGAAGAACTTGTTGCTTATTACCTTAAAAGGAAGATCAATGGCCGAAAGATTGAGTTGGAAATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTACCAGGGAAGTCATTGTTACCGGGGAAGGATTTGGAGTGGTATTTCTTTAGTCCTCGTGATAGAAAATACCCAAATGGATCAAGAACAAACCGTGCAACAAAATCTGGGTATTGGAAGGCCACAGGGAAGGATAGGAAAGTAAATTCGAAGGCTCGATCTGTGGGTATGAAGAAAACCCTAGTTTATTATCGAGGAAGAGCACCCCATGGCTCTCGCACAAACTGGGTTATGCATGAATATCGTCTCGATGAGAGAGAATGCGAAACTGCTTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTGAAGAAGACTGCAGTGATTCCTCAAAAAGTTGAGGGGCATTATGTTGAAGTTCCCAATGTCAATCAGATTACAAGCGATCAATCATCAAGCATTGAACTATACTCTGAAGGAAGGGGCGAAGATTTAGATAGCTCTAATTATTTTATGTCTGTGAATACTTGTTCACCCCACAATGTTGGAATTGAGACTCCTCTCAATATCAGTGGTGGAACGACCAGGGATCATGAGAAATGGTCACACGTCTCATTACAAGATCCAATATTTAGTCTTCCAACTTCATATCCTCATTTTGGAGCCTTATACCCTCCATCCAAGGTGGACATAGCACTAGAGTGTGCAAGAATGCAACATAGGTTTGTTATGCCCCCTTTGGAGGTTGATGACTTCCCTCAAGTTGGAATGTCAGAGCTGAAAATGACACAAGCCTCTAGTTCCATGCAAGGAAGCAGAACTGAAACGGATATATTACAGGAAATTCTTTCAGTGGCTCATGCCTCTCAGGAATTAATAAATCAATCCAGCTATTCGCAGGAATGGGGTGGCAATGATTATTATTGTGCTCCTAGTGATGACGAGTTTACCTTCATGGTTGGCGCTAATTACAATCATTCAAATGAAATGAGCTCAGTGAGGGATGTTGACAAAGCATGGGAAGATGCAAACACAAGGACTATAGAGATCGGAGATATGGATGAAGAATTTAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGAGAAGATTTAGAAAAGATGGAAGAACAAAATATTGTCCCAATAGAGGATATTTCAAGCCTCCAAACTAACATGAAAGAAAATAAGGTGCAAGAATTTGAGCAACACAACATGGAACACAATGACACTGAAATCAATGATTTCTCACTGGGTTTCATCAATGATGGCGACCCTACCGAGAACTTCACAGAAGATGGTAACAGTGATGATTATTCAGGTTCTCCAAGTTTTGAGGTTGTTGAGGAAATAAAGGTTAATCGTGGAATGTTTGTTTCGACTGGTCAAGTGGCCGAGACATTCTTTCTCCAAATGGTTCCATCACAAACCGTCCAAGTTCAGCTTAATACAGTGATGGCACACGATCATTATGTAGAGAATGCAGAGGCAATGCTGTTGATACTGGAGGACCAAGGGTCTTTAAGGAAGGTTAAGGCCTATGTGATGGGGAAGCTACTGAAGCCATCAATGACAATAGCAAGTGCAATTGTACTCGTCTTTGCACTTGTGTTGATGCATTATGCTTTTATAAAGGGAGAAGTGAAAATTTGGAATGAGACATGTTGCAGTAATAGTGGTAGCATCATGAAGAAAACGAATCAATCATCTCAGATAATGAAATGGAATGAGCCAAATGAGTTTTGGTTTGTTGGTATCAAAAGTGAGAAAGGATTAAGTGCAGTCTTGAAGAAAATAGGCATTTTTCTTACTATATCCTTTGCTCTTTGTAGCATGTGGGCTAACCAAAGTTGA 1956 0.41 MAPVLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKARSVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETASGLQDAYALCRVLKKTAVIPQKVEGHYVEVPNVNQITSDQSSSIELYSEGRGEDLDSSNYFMSVNTCSPHNVGIETPLNISGGTTRDHEKWSHVSLQDPIFSLPTSYPHFGALYPPSKVDIALECARMQHRFVMPPLEVDDFPQVGMSELKMTQASSSMQGSRTETDILQEILSVAHASQELINQSSYSQEWGGNDYYCAPSDDEFTFMVGANYNHSNEMSSVRDVDKAWEDANTRTIEIGDMDEEFKAERMVENLRWVGMSREDLEKMEEQNIVPIEDISSLQTNMKENKVQEFEQHNMEHNDTEINDFSLGFINDGDPTENFTEDGNSDDYSGSPSFEVVEEIKVNRGMFVSTGQVAETFFLQMVPSQTVQVQLNTVMAHDHYVENAEAMLLILEDQGSLRKVKAYVMGKLLKPSMTIASAIVLVFALVLMHYAFIKGEVKIWNETCCSNSGSIMKKTNQSSQIMKWNEPNEFWFVGIKSEKGLSAVLKKIGIFLTISFALCSMWANQS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00524 651 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Phco3g00524 651 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 292 - -
Phco3g00524 651 FunFam Nac domain-containing protein 86 14 158 - -
Phco3g00524 651 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Phco3g00524 651 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Phco3g00524 651 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00524 Phco-Chr3 4062434 4066088 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco3g00524 NAM 4.3e-41 No_clan