Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00486 ATGCCTTTCGAAGAAATGGTCAGGAAAGTTTGTGAAGAAATACATGTATCCACCATTGACCTACCACTCTTCTCTCACCGGAAAAAACTAATGTCAGTTCCAAACAATTCAATTGGTGGTACTGTTCCCTCTACCATTTGGCAGAACAGAACTTTAAATGCAACCGAGGAACTTATCTTGCTTGAGGGAAATCCTGTATGTTCGAATAATAACTCCTTAGTTCAGTACTGTGGACGTGAAAGTGACAATGACAAGGATGGAGGCTTCACTGTTGCCTGTCCAAGTCAAGGATGCCCCCCTTCTTATGAATACACTGTGGAGTGTATCTGTGCTGCCCCATTGATTGTTCATTATCGGTTGAAAAGTCCAGGTTTTTCAGATTTCCGTGCATATGTGAAAGAATTTGAGAACTTCCTGACAGATGGTCTTAGTGTGCATACTAATCAGCTGTTCATTGAGCGTTTTGCGTGGGAAGAAGGGCGGTTGAGAATGAACTTGAAGCTTTTTCCAGAATATATTGACAATACAAGTTCTCGTGAGTTCAGTACAAGTGAGGTTATTTGGATTAGGGACATGTTCAGAGAATGGGATATTCATGACACGATTACTCCCTCTTCAAGTTCCGGGATAAGCAAAGGTGCACTGGCTGGAATAATCTTAGGTGCAATTGCATGTGCAGTTACATTATCTGCAATTGTTTCCATTCTTATTTTGAGAATACGGTTGAGAGATTATCGTGCACTTTCCAAGCGGCGTAACGCATCTAGGATCTCGCTAAAAGTTGAAGGTGTAAGATCATTTGATTACAAAGAAATGGCCTTGGCTACAAACAATTTTAGTGAGTCTGCTCAAATTGGAGAAGGGGGCTATGGGAAGGTCTATAAAGGTCGTTTTTCTGATGGCACTGTTGTTGCCATAAAACGAGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGTTAGTCTATGAATATATGCCAAATGGAACCCTAAGGGATCACCTTTCTGCTTATTCAAAAGATGTTCTTAGTTTTTCTCTAAGGTTAAAGATTGCTCTAGGATCAGAAAAAGGTCTTCTATATCTACACACAAAAGCTAATCCTCCAATATTCCACCGAGACGTGAAGGCCAGCAATATATCAGCAAAAGTTTCCGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATATTGAAGGAAATGTACCTGCTCATGTATCCACTGTGGTAAAGGGGACCTCGGTTAATATGGCATACCAATTTGGTGCCATTTCTCTGGTTGTTGATAAACGTATTGAGTCTTATCCATTTGAGTATGCAGTGAGATTTTTGACTTCAGCCTTAAAGTGTAGCAAAGATTTACCAGATGAGAGGCCTAAAATGGCAGAAGTGGCGAGAGAGCTTGAATACATTTGTTCTATGTTACTTGAGCCAGATTCCAAGGGAGTTGAATATGTTACAAGTGATTCTTCTGGTACAATATTGAGTTCACAACCTTCATCATCCACTATAAAGACTCCTTTTATTTCAGGAGATGTGTCAGGTAGTGACCTTGTCAGTGGAAGTGTACCAACCATCAAGCCAAGATAG 1677 0.4109 MPFEEMVRKVCEEIHVSTIDLPLFSHRKKLMSVPNNSIGGTVPSTIWQNRTLNATEELILLEGNPVCSNNNSLVQYCGRESDNDKDGGFTVACPSQGCPPSYEYTVECICAAPLIVHYRLKSPGFSDFRAYVKEFENFLTDGLSVHTNQLFIERFAWEEGRLRMNLKLFPEYIDNTSSREFSTSEVIWIRDMFREWDIHDTITPSSSSGISKGALAGIILGAIACAVTLSAIVSILILRIRLRDYRALSKRRNASRISLKVEGVRSFDYKEMALATNNFSESAQIGEGGYGKVYKGRFSDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKDVLSFSLRLKIALGSEKGLLYLHTKANPPIFHRDVKASNISAKVSDFGLSRLAPVPDIEGNVPAHVSTVVKGTSVNMAYQFGAISLVVDKRIESYPFEYAVRFLTSALKCSKDLPDERPKMAEVARELEYICSMLLEPDSKGVEYVTSDSSGTILSSQPSSSTIKTPFISGDVSGSDLVSGSVPTIKPR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00486 558 Gene3D Phosphorylase Kinase; domain 1 249 354 - -
Phco3g00486 558 Pfam Protein tyrosine and serine/threonine kinase 282 421 IPR001245 GO:0004672|GO:0006468
Phco3g00486 558 SMART serkin_6 279 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00486 558 Gene3D Transferase(Phosphotransferase) domain 1 355 452 - -
Phco3g00486 558 SUPERFAMILY Protein kinase-like (PK-like) 264 517 IPR011009 -
Phco3g00486 558 ProSiteProfiles Protein kinase domain profile. 279 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00486 558 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Phco3g00486 558 PANTHER OS01G0750732 PROTEIN 93 518 - -
Phco3g00486 558 MobiDBLite consensus disorder prediction 519 550 - -
Phco3g00486 558 FunFam Leucine-rich repeat protein kinase family protein 243 354 - -
Phco3g00486 558 MobiDBLite consensus disorder prediction 519 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00486 Phco-Chr3 3652346 3657554 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Phco3g00486 PK_Tyr_Ser-Thr 2.4e-26 CL0016