Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00461 ATGGCACGACATTGTTATGTGGAAACCGACCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTTCTTGGAATTGAGGTAGCATGGAACCAAGTCAGACTCAATGAGGCGCTTCGCACCCCGGAAGATTTGCAGAGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAGGGCCTTCAACTTTATCACAGAATTGTTCACGTCAGGGTCACTTAGAGAATACAGGAAGAAATATGAGCGTGTCAGCATACAAGGTATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTATCTACATGGCCATGATCCACCAGTGATCCACAGGGACCTTAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGACTTGCAGCAATTCTTCGTGGATCCCAATTAGCACACAGTGTCATAGGTACCCCTGAGTTCATGGCACCAGAATTGTACGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAAATCTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTCCGCATTGAGGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTGCTACCTGCAGAAAAGAGGCCTTCGGCAAAAGAATTGTTGCTTGACCCGTTTCTTGCATCTGATGATCCATCATCAACAACGAAATATGCAATTCAGAAGCCATTTTTAAATGCCACTGAGATGGAGAAACTACAATTAACTGATGATCTTCCGAGGACTGGAATGAAAGTGATAGGAAAACTGAATCCTGAAGATGATACTATCTTTCTCAAAGTACAAATTTCTGATAAGAATGGTTCTGTTAGGAATGTATTCTTTCCCTTTGACATTTTCAATGACACTCCTATTGATGTTGCAACTGAGATGGTAAAAGAGTTGGAGATTGCTGATTGGGAACCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCTCAGAGGAGACAAAGTAGCTGTTCAGATGCCTTCCACACATTCAGTTACATAGATGATGATTGTGATGACTATGATGCACCTCATCATCATCTCCGCTCGTTCTCTTCAAGTTCATCATTCCAAGAAGCAATGCCAGATTTTGTCAGTAAAGCTGAGGAAATGTCAAGTGGATATTATTGGCTCCATGATGATTCGCATGATGATACCAGTTCACGATGCTCTTCACAGGGGACATATTCCAACTTGAATTACTCTTCTGTGGATGATCATCAAGATCAGTACAACGTGCCTTCTTTGAGAAAAGATAAACTTCCCATCATAAAGAGTCACAGCAAGGGCAAAAAGGTTTCCCCTGGCGAAGACTTGAGCAATTTCAACCAATGTAAACTCATGGCAGGATCACAGGTTCCTTTTACCAGTAGAAGTAAGATGATGATGAACAATCACAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAACTATTACACCGATCACTGGTTGAGGAGGTCAACAAAAGAAGGTTGTTCAATACAGTTGGTGCTGTGGAAAATATTGGGTTTCAGGCACCTTGTGATGTTACCACAAAAAGGTCACATCATGTATCTTCTGCTCCAAATGAGAACTCTCCAAGAAGGGGCAAGGGGGAAAAAAGTAAGAGATGA 1827 0.4127 MARHCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNRAFNFITELFTSGSLREYRKKYERVSIQGIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQLAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGKCLLPAEKRPSAKELLLDPFLASDDPSSTTKYAIQKPFLNATEMEKLQLTDDLPRTGMKVIGKLNPEDDTIFLKVQISDKNGSVRNVFFPFDIFNDTPIDVATEMVKELEIADWEPFEIANMIDREISALLPQRRQSSCSDAFHTFSYIDDDCDDYDAPHHHLRSFSSSSSFQEAMPDFVSKAEEMSSGYYWLHDDSHDDTSSRCSSQGTYSNLNYSSVDDHQDQYNVPSLRKDKLPIIKSHSKGKKVSPGEDLSNFNQCKLMAGSQVPFTSRSKMMMNNHRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFNTVGAVENIGFQAPCDVTTKRSHHVSSAPNENSPRRGKGEKSKR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00461 608 MobiDBLite consensus disorder prediction 584 608 - -
Phco3g00461 608 Gene3D - 318 391 - -
Phco3g00461 608 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00461 608 FunFam probable serine/threonine-protein kinase WNK9 99 279 - -
Phco3g00461 608 SUPERFAMILY Protein kinase-like (PK-like) 17 300 IPR011009 -
Phco3g00461 608 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Phco3g00461 608 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Phco3g00461 608 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00461 608 FunFam Probable serine/threonine-protein kinase WNK1 1 97 - -
Phco3g00461 608 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00461 608 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 583 - -
Phco3g00461 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Phco3g00461 608 CDD STKc_WNK 14 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00461 Phco-Chr3 3414962 3418953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phco3g00461 Pkinase 1.3e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01629 11 12523153 12527464 Phco3g00461 3 3414962 3418953 PCT