Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00426 ATGTCTGTCCGAAATTTCAACCCTCTAGAACAGAAAAGGCTATGCAGAGTTGTGGGATTTATCTCCAGTGTGATTGGACTTATCTGTTATGCGTTGAGTTCCTCTTTCAACCATATATTTGGAGAGTGGAACTTGTTGAAGATCATCCTTTACACCATGGTAAGTTTCTCTATCAGCAGCTTCATGTTATTTATGAAGAAATGGAAACGTTCCAGGTGTTTCTCGCTGAAAGTTCACGTGGGTGTTCTGGTTTTGTTGCTCACTTCTTTCTACTCTTTCGTATCTGATAAATCTGCGAATGGAAAACCAAACGGATTAAGTTTGATTTCGTGTGGAGCCTTTGCTTTGATGTCTTTGTGCCTTTCAAGGCAGATCGACCTAGGGTTTGGAGCAGATCTCCTCAATTTCTTCCTTGGATGTCTAACTGTTCAACTCATGGAGATCAATTTGGTGCTCTTTATTGTTGCAGCCATCTTGTGCTATTGTTTCATGATTCTTCGTTCTAAAGAGTCTGAGTCAGAGATTGGAACAGTAGCAATGGAAGACCACGTAACCATAGAACTTGGTACTGCAGATAGTGGAGAAAGAGGAGCCGATGACAACAATGGCTTTCAATCTAATGATAGGAACATCGGCAACCAACAAATTCCGTTGTTAAGAATGGTAGGAGATGGGTACAATTGGAAAAAATATGAAGATAGAGTAGGGAAAGGGAATGAAAATCAAGTAAGTTACTATAGATGCACACACCCCAATTGTTATGTGAAGAAAAAAGTTGATAGAACTAAAGATGGGAAAATTGGTGAGATACATTACCAGGGTAACCATGCACACTGGGAGCGTCTGAATAACATGAAGAGGAACTCTTCATCTGAATATTTATATTCACTGCTAACTTCAGACTCTGTCACCACAGACTTGCCAGATCAATCATTTGCCTCCCAGAGCAACGAACAATTGGATTATGATGTGCAGTTCTGGAGAACTCATCAGTATCCACATGATATATAA 1011 0.3996 MSVRNFNPLEQKRLCRVVGFISSVIGLICYALSSSFNHIFGEWNLLKIILYTMVSFSISSFMLFMKKWKRSRCFSLKVHVGVLVLLLTSFYSFVSDKSANGKPNGLSLISCGAFALMSLCLSRQIDLGFGADLLNFFLGCLTVQLMEINLVLFIVAAILCYCFMILRSKESESEIGTVAMEDHVTIELGTADSGERGADDNNGFQSNDRNIGNQQIPLLRMVGDGYNWKKYEDRVGKGNENQVSYYRCTHPNCYVKKKVDRTKDGKIGEIHYQGNHAHWERLNNMKRNSSSEYLYSLLTSDSVTTDLPDQSFASQSNEQLDYDVQFWRTHQYPHDI 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00426 336 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 207 299 IPR044810 GO:0003700
Phco3g00426 336 SUPERFAMILY WRKY DNA-binding domain 220 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g00426 336 ProSiteProfiles WRKY domain profile. 217 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g00426 336 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco3g00426 336 MobiDBLite consensus disorder prediction 191 210 - -
Phco3g00426 336 Gene3D WRKY domain 214 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco3g00426 336 Pfam WRKY DNA -binding domain 224 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco3g00426 Phco-Chr3 3113458 3114468 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco3g00426 WRKY 4.4e-15 CL0274