Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00364 ATGGCTGCAGCTTTAGAGTGCTGGTCCAGCCGCGCCACCACCGCCGCCGACGATGACACGGTGGAGCAGGTCCTCATGCGCACCCATCACAGATCCGAAGGGTCGGCTTCCACCCCTAAGGACCCCTCCTCCATCCCCAACGTCCACAAGAAGTTCCAGAAACTCACCCGCAACGTCTCCGAAGCCATCGCCTCCTTCAGAAACTCGCTCAACCTCGATTCACCTCCTTCCTCCAAAGTTGATGCCTCTTCCCGGAAACTTGCCTGGGGAAGTGTCGTTCGCAACCTTACTCAGCTCTACCCCGGAAGCCAACTCCCCGAGAAACTCATGTCAAACATCCGCAAGCATTATGATTCATTGCCCCTCAGTTATGCACAGGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCGGAGAGTGACCAGCCTGCGATTTTGATTCAAGAGGAGTGTGATGATGAGGTTCAAGGTTCTGCTCTGAGGCTCACGTTTGCTTGCAACTCTCCAATTTCGTGGCCTGCGATGTCGGGGGCATTGGATAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGCTTTCACCTTGGGAGTTGTGCTTCTTGTGGTTCAGTCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTGAAGTTTGCTATGAAGAAGCCTAAAACTGGTGCTGTGAAGCTTCCCTTCGGGCTTTGTGGGTGCCAGGAGGAAAATTCCAAAGGGAGAGATTTTGTGGAGATTGAAGAAGAAAACGGTGATGGTTACCGGGGAAAGGAGTTTGAGAATTCAAGTCAAAGGATTCAGCTTCAGGTGCCTTTGCCTTCTTCATCTTTTGTTGTTTCAGTGGATGAATGGCAGACCATAAAGTCAGGTGGGGATGAGATTGAAAAATGGTTGTTGAACTCAGATAGTGTTGAGTTTGTTGACCAGATTGGGCCAAATTCGTATAAGGGAGTGTATATGGGAAAGAGGGTTGGGATTGAGAAGCTGAAGGGGTGTGATAAAGGGAATTCTTATGAGTTTGAGCTCCACAAAGATCTGCTGGAACTCATGACTTGTGGTCATAGGAACATTCTGCAGTTCTGCGGTATTTGCGTGGATGATAATCATGGGTTGTGCGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGATCTGATGTTGAAGAACAAGAAGCTGCAGAATAAGGATATTGTGAGGATTGCAGTTGATGTGGCTGAAGGGATCAAGTTTATGAATGAACATGGTGTTGCATATAGAGACCTTAATACACAGAGAATTCTGTTGGATAGGCACGGAAATGCTTGCTTGGGAGATATGGGTATCGTCACTGCCTGCAAGAGTGTTGGAGAAGCTATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCTGAGATAATAGCAGGGGACCCAGAGAATGTGACAGAGACATGGATGAGTAATGTGTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTTCATTTTCACCTGTGCAAGCAGCAGTGGGTATTGCTGCATGTGGCCTTAGACCTGAAATCCCAAAAGACTGCCAACAAACTCTAAAATACATTATGACAAAGTGCTGGAACAACACCCCTTCCAAACGCCCTCAGTTCTCTGAAATCTTAGCCATATTGCTGCGACCAAACAACAACAGATAA 1737 0.4727 MAAALECWSSRATTAADDDTVEQVLMRTHHRSEGSASTPKDPSSIPNVHKKFQKLTRNVSEAIASFRNSLNLDSPPSSKVDASSRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASESDQPAILIQEECDDEVQGSALRLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKAFTLGVVLLVVQSGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRDFVEIEEENGDGYRGKEFENSSQRIQLQVPLPSSSFVVSVDEWQTIKSGGDEIEKWLLNSDSVEFVDQIGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMLKNKKLQNKDIVRIAVDVAEGIKFMNEHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKYIMTKCWNNTPSKRPQFSEILAILLRPNNNR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00364 578 Gene3D Transferase(Phosphotransferase) domain 1 314 575 - -
Phco3g00364 578 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 102 571 - -
Phco3g00364 578 SUPERFAMILY Protein kinase-like (PK-like) 301 571 IPR011009 -
Phco3g00364 578 ProSiteProfiles Protein kinase domain profile. 321 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00364 578 PRINTS Tyrosine kinase catalytic domain signature 392 405 IPR001245 GO:0004672|GO:0006468
Phco3g00364 578 PRINTS Tyrosine kinase catalytic domain signature 542 564 IPR001245 GO:0004672|GO:0006468
Phco3g00364 578 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Phco3g00364 578 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Phco3g00364 578 Pfam Protein tyrosine and serine/threonine kinase 356 570 IPR001245 GO:0004672|GO:0006468
Phco3g00364 578 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00364 Phco-Chr3 2625762 2629978 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Phco3g00364 PK_Tyr_Ser-Thr 8e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00364 3 2625762 2629978 Phco3g00364 3 2625762 2629978 ECH