Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00361 ATGGCACCATTCACTTCATCGAAGTTATTGCCGGCGGTGCTGGCTCTGTTTTTGGCGTTGAGTCAGAAACAGAGTCTCTGTTCGACGCTCGAGAGCGAAGGTTTGGCGCTGCTGGCGTTGAAGGAGAGCGTGGTGACAGACCCGCAGGGCGCTTTATCAAGCTGGAGTGGTGAAAATGGAGACGTTATCGATCCATGCTCGTGGTTCGGTGTGGAGTGCTCTCACGGTAATGTCGTGACCTTGAATTTGAAAGACCTTTGTCTTGAAGGAACACTAGCACCAGAAGTTGGAATGCTGGCTCACATAAAATCAATCATTTTGCGCAACAATTCTTTCTTTGGAGAAATTCCTGAGGAGATCCTATACTTACAGGAGTTGGAAGTCCTTGACTTGGGACATAACTACTTTAGCGGATCACTTCCATTTGACCATGGCAATATGCCATCCCTGACCACTCTTCTATTGGACAACAATTACCATCTGACCAGCTTAAATCCAGAGCTGTATAAGTTCAAGATGAATTCTGAATTTCATGCTGATGAGGAACAACTAACTGGTGCCACCACTACTAGAGAAGCATATGTTGGCAGATGTACTTTATGGCACATTGGCCAACATGGGGATAGAGCATACAGGAGGCAACTTCTAAAAGTAGCAAATTTTGCTAATACACCCAGAATCCAAGGGCATGTTAATCAAGGGATACTTAAACAATTAGCATCGCATTTCCCTTTTTCATTACCGCCAAATTTTGAGCCTTTCTCATCATCACCATCACTTTCACCGTCAGAAAGTCCCTCAAATTCGCCATCATCATCTCCCTCAGATATTTTTTTCACTCCTTCGCCCTCTCCTTCGCCTGTAGTGTCACTAACTCCAGACGTCTCACCCCCAGCAAACACTCCTCTCACTGTGTCTACACCACCAGTTAATTGGGTTCCAGCACCTAGCCCTTCTGCATTTTCTACCCACGGGAGCACATACAATTCCAATCAAATACATCACTCGGCGATAATCTGGTCTGTAGTTGGGGGTTTCTCTTTATTGATTTTGGTGTCAGCCATTTTTGCATGCTTTCGAAGTAGGAAGGTTGTGACTGTTAAACCTTGGTCCACAGGATTGAGTGGCCAGCTGCAGAAAGCCTTTGTAAAAGGTGTGCCAAGTCTCAAACGAGGAGAAATTGAAGCAGCTTGTGAATATTTCAGCAACATTATCGGTTCGCTTCCTGATGGAACTGTGTATAAGGGGACTCTCTCTAGTGGAGTCGAGATAGCTGTAGCATCCTCTGCAGTAAACACAGCTCAAAAATGGTCAAAAAGTATGGAAGCTCAGTTCCGAAATAAGATAGCAACATTGTCTAGAGTGAATCACAAGAATTTTGTGAATCTAATTGGGTACTGTGAAGAGAATAAGCCATTCTCAAGAATGATGGTGTTTGAGTACGCTCCGAATGGAACACTCTTTGAGCATATACACATTAGAGAAGCGGAAGAACTAAATTGGACAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGCCTAGAGTATATGCATGACCTAAAACCCTCCATTGCCCATAGAAACCTGCAATCTTCATTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGCGGCAAAGAATGGGTCTGCAACCACACAACTCTTGGAAACATCGTCAGCAGATGCCAAGGACAATGTTTACAGCTTTGGAATAATACTGTTTGAGTTGATTACGGGGAAAATCCCCCTTGCCGGGAACAATGAACTTCTGACAGATTGGGCAGCGGAATATTTAAGGTGGGGGAAATCCTTAAGAGATGTTATGGATCCAAGACTGAACTCTTTGCAGGAAGAAGAGATTGAAGAATGGTCTGAAGTGATAAGAAACTGTGTACATCCAGATAGAGAGAAACGGCCAACTATGAAAGAAGTTACATCTAGACTCAAAGAAATAACAGCTATGGGGCCTGATGGAGCAAATCCAAAAGCATCACCACTTTGGTGGGCAGAAATGGCGATTACGTCCACTGATTCAAGTTGA 2076 0.4364 MAPFTSSKLLPAVLALFLALSQKQSLCSTLESEGLALLALKESVVTDPQGALSSWSGENGDVIDPCSWFGVECSHGNVVTLNLKDLCLEGTLAPEVGMLAHIKSIILRNNSFFGEIPEEILYLQELEVLDLGHNYFSGSLPFDHGNMPSLTTLLLDNNYHLTSLNPELYKFKMNSEFHADEEQLTGATTTREAYVGRCTLWHIGQHGDRAYRRQLLKVANFANTPRIQGHVNQGILKQLASHFPFSLPPNFEPFSSSPSLSPSESPSNSPSSSPSDIFFTPSPSPSPVVSLTPDVSPPANTPLTVSTPPVNWVPAPSPSAFSTHGSTYNSNQIHHSAIIWSVVGGFSLLILVSAIFACFRSRKVVTVKPWSTGLSGQLQKAFVKGVPSLKRGEIEAACEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVNTAQKWSKSMEAQFRNKIATLSRVNHKNFVNLIGYCEENKPFSRMMVFEYAPNGTLFEHIHIREAEELNWTMRMRIAMGIAYCLEYMHDLKPSIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCAAKNGSATTQLLETSSADAKDNVYSFGIILFELITGKIPLAGNNELLTDWAAEYLRWGKSLRDVMDPRLNSLQEEEIEEWSEVIRNCVHPDREKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00361 691 SUPERFAMILY L domain-like 27 172 - -
Phco3g00361 691 Gene3D Phosphorylase Kinase; domain 1 367 481 - -
Phco3g00361 691 FunFam Nuclear pore complex protein NUP107 30 190 - -
Phco3g00361 691 MobiDBLite consensus disorder prediction 256 308 - -
Phco3g00361 691 ProSiteProfiles Protein kinase domain profile. 399 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00361 691 Gene3D Ribonuclease Inhibitor 29 203 IPR032675 -
Phco3g00361 691 Pfam Protein tyrosine and serine/threonine kinase 404 660 IPR001245 GO:0004672|GO:0006468
Phco3g00361 691 PANTHER PROTEIN MALE DISCOVERER 2 11 688 - -
Phco3g00361 691 SUPERFAMILY Protein kinase-like (PK-like) 394 660 IPR011009 -
Phco3g00361 691 Gene3D Transferase(Phosphotransferase) domain 1 482 670 - -
Phco3g00361 691 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Phco3g00361 691 MobiDBLite consensus disorder prediction 256 285 - -
Phco3g00361 691 FunFam Inactive receptor-like serine/threonine-protein kinase 373 481 - -
Phco3g00361 691 MobiDBLite consensus disorder prediction 293 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00361 Phco-Chr3 2593985 2600178 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phco3g00361 PK_Tyr_Ser-Thr 2.3e-28 CL0016