Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00358 ATGGGACAAGTTAAGATTAGAGGGAACTTAGTAGAAGAAAAATTATGGCCAAAGATACCCACTTTAATTAAGCCTATTCCTCTAAGACCTCAAAAACCCTCATATCCACTTCATAAGCTTCCCACCATTCCAGAAAATGATCACATTCTTACAGAGGAAAACTCTGTTAATGGAGATCACAACACTTCCAATGAAGCCCAACCAAACATTGAGCAAGAAACGGGAAATAAGTTCAACAGAATCGTCTCAAACCGACATGCTGCAAGAAGATCGAGATTGAGGAAACTTGCATACATCGAGGAGTTGGAAAACGCATTGAAATCGTACGAGAGGAAGAAAGACATTCTCCATGGACAAATTGCAGAGCAACGAAAGAAGCAGCTGTTGTTGGAAATTGAGCATCATACATTGAAATTTCATATGGCTGCTCGTGAAAAGCAAAGAATTCTTCAAGAAGTTGAGATTGAAAAGAACAGAGCAGAAGTGGATAAAATGTTGGAAGTGCAAAGGAGAATGGTCAATTTCACATCGCTGCAGCTTATCACCAATTCCAACTTTAACCCTTCAGCCTTGGCATGA 579 0.3972 MGQVKIRGNLVEEKLWPKIPTLIKPIPLRPQKPSYPLHKLPTIPENDHILTEENSVNGDHNTSNEAQPNIEQETGNKFNRIVSNRHAARRSRLRKLAYIEELENALKSYERKKDILHGQIAEQRKKQLLLEIEHHTLKFHMAAREKQRILQEVEIEKNRAEVDKMLEVQRRMVNFTSLQLITNSNFNPSALA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00358 192 Gene3D - 80 135 - -
Phco3g00358 192 Coils Coil 143 163 - -
Phco3g00358 192 Coils Coil 92 126 - -
Phco3g00358 192 SMART brlzneu 71 136 IPR004827 GO:0003700|GO:0006355
Phco3g00358 192 SUPERFAMILY Leucine zipper domain 78 130 IPR046347 GO:0003700|GO:0006355
Phco3g00358 192 PANTHER BASIC LEUCINE ZIPPER 34 54 177 - -
Phco3g00358 192 Pfam Basic region leucine zipper 80 125 IPR004827 GO:0003700|GO:0006355
Phco3g00358 192 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 94 IPR004827 GO:0003700|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco3g00358 bZIP_2 5.2e-07 CL0018